Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF254 and GFF255 are separated by 291 nucleotides GFF255 and GFF256 are separated by 52 nucleotides GFF256 and GFF257 are separated by 369 nucleotides
GFF254 - Thymidylate synthase, at 267,970 to 268,764
GFF254
GFF255 - hypothetical protein, at 269,056 to 269,337
GFF255
GFF256 - Biotin synthase, at 269,390 to 270,361
GFF256
GFF257 - Phosphomethylpyrimidine synthase, at 270,731 to 272,605
GFF257
Position (kb) 269
270
271 Strain fitness (log2 ratio) -2
-1
0
1 at 268.770 kb on - strand at 268.967 kb on + strand at 268.968 kb on - strand at 269.011 kb on + strand at 269.011 kb on + strand at 269.012 kb on - strand at 269.012 kb on - strand at 269.104 kb on + strand, within GFF255 at 269.473 kb on + strand at 269.473 kb on + strand at 269.474 kb on - strand at 269.481 kb on + strand at 269.481 kb on + strand at 269.482 kb on - strand at 269.829 kb on + strand, within GFF256 at 269.830 kb on - strand, within GFF256 at 269.830 kb on - strand, within GFF256 at 269.890 kb on - strand, within GFF256 at 270.168 kb on + strand, within GFF256 at 270.168 kb on + strand, within GFF256 at 270.168 kb on + strand, within GFF256 at 270.402 kb on + strand at 270.500 kb on + strand at 270.500 kb on + strand at 270.502 kb on + strand at 270.503 kb on - strand at 270.551 kb on - strand at 270.679 kb on + strand at 270.679 kb on + strand at 270.680 kb on - strand at 270.680 kb on - strand at 270.685 kb on + strand at 270.685 kb on + strand at 270.885 kb on - strand at 270.885 kb on - strand at 270.885 kb on - strand at 270.903 kb on - strand at 270.905 kb on - strand at 270.905 kb on - strand at 270.905 kb on - strand at 270.906 kb on - strand at 271.124 kb on + strand, within GFF257 at 271.125 kb on - strand, within GFF257 at 271.160 kb on + strand, within GFF257 at 271.160 kb on + strand, within GFF257 at 271.160 kb on + strand, within GFF257 at 271.160 kb on + strand, within GFF257 at 271.161 kb on - strand, within GFF257 at 271.161 kb on - strand, within GFF257
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 268,770 - +0.8 268,967 + +0.4 268,968 - -1.1 269,011 + -0.4 269,011 + +1.2 269,012 - +0.1 269,012 - -0.1 269,104 + GFF255 0.17 +0.2 269,473 + +0.4 269,473 + +1.0 269,474 - -0.5 269,481 + -0.4 269,481 + -0.3 269,482 - -0.2 269,829 + GFF256 0.45 +1.0 269,830 - GFF256 0.45 +0.2 269,830 - GFF256 0.45 +0.4 269,890 - GFF256 0.51 -1.4 270,168 + GFF256 0.80 -0.5 270,168 + GFF256 0.80 -0.2 270,168 + GFF256 0.80 +0.3 270,402 + -0.3 270,500 + -0.7 270,500 + -0.8 270,502 + -0.2 270,503 - -1.5 270,551 - -2.2 270,679 + -0.6 270,679 + -1.8 270,680 - -0.0 270,680 - -1.4 270,685 + -1.2 270,685 + -0.7 270,885 - -2.1 270,885 - -0.7 270,885 - -2.4 270,903 - -0.4 270,905 - -1.1 270,905 - -1.9 270,905 - -0.6 270,906 - -1.1 271,124 + GFF257 0.21 -2.6 271,125 - GFF257 0.21 -1.7 271,160 + GFF257 0.23 -0.5 271,160 + GFF257 0.23 -2.0 271,160 + GFF257 0.23 -2.7 271,160 + GFF257 0.23 -1.2 271,161 - GFF257 0.23 -0.0 271,161 - GFF257 0.23 -2.7
Or see this region's nucleotide sequence