Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2504 and GFF2505 are separated by 339 nucleotides GFF2505 and GFF2506 are separated by 67 nucleotides GFF2506 and GFF2507 are separated by 1 nucleotides
GFF2504 - Chromosome partition protein Smc, at 163,561 to 167,013
GFF2504
GFF2505 - Chaperedoxin, at 167,353 to 168,279
GFF2505
GFF2506 - Lon protease 2, at 168,347 to 169,063
GFF2506
GFF2507 - hypothetical protein, at 169,065 to 169,412
GFF2507
Position (kb) 167
168
169 Strain fitness (log2 ratio) -2
-1
0
1 at 167.237 kb on + strand at 167.285 kb on - strand at 167.285 kb on - strand at 167.653 kb on + strand, within GFF2505 at 167.653 kb on + strand, within GFF2505 at 167.654 kb on - strand, within GFF2505 at 167.654 kb on - strand, within GFF2505 at 167.724 kb on + strand, within GFF2505 at 167.919 kb on + strand, within GFF2505 at 168.250 kb on - strand at 168.397 kb on + strand at 168.398 kb on - strand at 168.410 kb on + strand at 168.410 kb on + strand at 168.410 kb on + strand at 168.411 kb on - strand at 168.411 kb on - strand at 168.411 kb on - strand at 168.411 kb on - strand at 168.411 kb on - strand at 168.430 kb on + strand, within GFF2506 at 168.516 kb on - strand, within GFF2506 at 168.671 kb on + strand, within GFF2506 at 168.671 kb on + strand, within GFF2506 at 168.671 kb on + strand, within GFF2506 at 168.672 kb on - strand, within GFF2506 at 168.672 kb on - strand, within GFF2506 at 168.738 kb on - strand, within GFF2506 at 169.061 kb on + strand at 169.062 kb on - strand at 169.062 kb on - strand at 169.265 kb on - strand, within GFF2507
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 167,237 + -0.8 167,285 - -0.2 167,285 - -0.5 167,653 + GFF2505 0.32 +0.9 167,653 + GFF2505 0.32 -0.8 167,654 - GFF2505 0.32 -0.3 167,654 - GFF2505 0.32 -0.3 167,724 + GFF2505 0.40 +0.7 167,919 + GFF2505 0.61 -0.3 168,250 - +0.3 168,397 + -0.4 168,398 - +0.5 168,410 + -0.7 168,410 + +0.3 168,410 + +0.4 168,411 - -0.3 168,411 - +0.0 168,411 - +0.6 168,411 - -0.4 168,411 - +0.4 168,430 + GFF2506 0.12 +0.3 168,516 - GFF2506 0.24 -0.3 168,671 + GFF2506 0.45 -0.3 168,671 + GFF2506 0.45 -0.8 168,671 + GFF2506 0.45 -2.1 168,672 - GFF2506 0.45 +1.3 168,672 - GFF2506 0.45 -0.2 168,738 - GFF2506 0.55 +0.8 169,061 + +0.4 169,062 - -1.2 169,062 - -0.1 169,265 - GFF2507 0.57 -1.7
Or see this region's nucleotide sequence