Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2464 and GFF2465 are separated by 134 nucleotides GFF2465 and GFF2466 are separated by 0 nucleotides GFF2466 and GFF2467 are separated by 656 nucleotides
GFF2464 - hypothetical protein, at 122,616 to 122,969
GFF2464
GFF2465 - hypothetical protein, at 123,104 to 123,847
GFF2465
GFF2466 - lipid kinase YegS, at 123,848 to 124,804
GFF2466
GFF2467 - hypothetical protein, at 125,461 to 126,174
GFF2467
Position (kb) 123
124
125 Strain fitness (log2 ratio) -2
-1
0
1 at 123.055 kb on - strand at 123.055 kb on - strand at 123.712 kb on - strand, within GFF2465 at 123.841 kb on - strand at 123.849 kb on + strand at 123.849 kb on + strand at 123.850 kb on - strand at 123.883 kb on + strand at 123.972 kb on + strand, within GFF2466 at 123.972 kb on + strand, within GFF2466 at 123.973 kb on - strand, within GFF2466 at 123.973 kb on - strand, within GFF2466 at 123.973 kb on - strand, within GFF2466 at 124.197 kb on + strand, within GFF2466 at 124.198 kb on - strand, within GFF2466 at 124.198 kb on - strand, within GFF2466 at 124.266 kb on + strand, within GFF2466 at 124.266 kb on + strand, within GFF2466 at 124.267 kb on - strand, within GFF2466 at 124.335 kb on + strand, within GFF2466 at 124.335 kb on + strand, within GFF2466 at 124.560 kb on + strand, within GFF2466 at 124.561 kb on - strand, within GFF2466 at 124.561 kb on - strand, within GFF2466 at 124.617 kb on + strand, within GFF2466 at 124.932 kb on - strand at 124.932 kb on - strand at 124.940 kb on + strand at 124.941 kb on - strand at 125.143 kb on - strand at 125.250 kb on - strand at 125.250 kb on - strand at 125.686 kb on + strand, within GFF2467 at 125.687 kb on - strand, within GFF2467
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 123,055 - -0.5 123,055 - +0.5 123,712 - GFF2465 0.82 -0.6 123,841 - -0.1 123,849 + -0.6 123,849 + +0.1 123,850 - -0.2 123,883 + -0.1 123,972 + GFF2466 0.13 +0.5 123,972 + GFF2466 0.13 -2.1 123,973 - GFF2466 0.13 -1.6 123,973 - GFF2466 0.13 +0.2 123,973 - GFF2466 0.13 +0.4 124,197 + GFF2466 0.36 -0.2 124,198 - GFF2466 0.37 -0.3 124,198 - GFF2466 0.37 +0.2 124,266 + GFF2466 0.44 -0.3 124,266 + GFF2466 0.44 -0.7 124,267 - GFF2466 0.44 +0.8 124,335 + GFF2466 0.51 -0.3 124,335 + GFF2466 0.51 +0.1 124,560 + GFF2466 0.74 -0.5 124,561 - GFF2466 0.75 +0.4 124,561 - GFF2466 0.75 -0.4 124,617 + GFF2466 0.80 +0.4 124,932 - +0.0 124,932 - -0.1 124,940 + +0.2 124,941 - -0.1 125,143 - -0.2 125,250 - -0.1 125,250 - +0.3 125,686 + GFF2467 0.32 -0.2 125,687 - GFF2467 0.32 +0.1
Or see this region's nucleotide sequence