Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2381 and GFF2382 are separated by 33 nucleotides GFF2382 and GFF2383 are separated by 93 nucleotides GFF2383 and GFF2384 overlap by 4 nucleotides GFF2384 and GFF2385 overlap by 4 nucleotides
GFF2381 - hypothetical protein, at 35,155 to 36,156
GFF2381
GFF2382 - hypothetical protein, at 36,190 to 36,375
GFF2382
GFF2383 - Sulfate/thiosulfate import ATP-binding protein CysA, at 36,469 to 37,512
GFF2383
GFF2384 - Sulfate transport system permease protein CysW, at 37,509 to 38,435
GFF2384
GFF2385 - Sulfate transport system permease protein CysT, at 38,432 to 39,286
GFF2385
Position (kb) 36
37
38 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 35.494 kb on + strand, within GFF2381 at 35.494 kb on + strand, within GFF2381 at 35.494 kb on + strand, within GFF2381 at 35.495 kb on - strand, within GFF2381 at 35.495 kb on - strand, within GFF2381 at 35.495 kb on - strand, within GFF2381 at 35.686 kb on - strand, within GFF2381 at 35.821 kb on + strand, within GFF2381 at 35.822 kb on - strand, within GFF2381 at 35.951 kb on - strand, within GFF2381 at 36.022 kb on + strand, within GFF2381 at 36.424 kb on + strand at 36.425 kb on - strand at 36.489 kb on - strand at 36.755 kb on + strand, within GFF2383 at 36.755 kb on + strand, within GFF2383 at 36.755 kb on + strand, within GFF2383 at 36.839 kb on + strand, within GFF2383 at 36.839 kb on + strand, within GFF2383 at 36.839 kb on + strand, within GFF2383 at 36.839 kb on + strand, within GFF2383 at 36.840 kb on - strand, within GFF2383 at 36.840 kb on - strand, within GFF2383 at 36.840 kb on - strand, within GFF2383 at 36.840 kb on - strand, within GFF2383 at 36.840 kb on - strand, within GFF2383 at 37.265 kb on + strand, within GFF2383 at 37.265 kb on + strand, within GFF2383 at 37.266 kb on - strand, within GFF2383 at 37.266 kb on - strand, within GFF2383 at 37.266 kb on - strand, within GFF2383 at 37.266 kb on - strand, within GFF2383 at 37.300 kb on + strand, within GFF2383 at 37.618 kb on + strand, within GFF2384 at 37.618 kb on + strand, within GFF2384 at 37.627 kb on + strand, within GFF2384 at 37.627 kb on + strand, within GFF2384 at 37.954 kb on + strand, within GFF2384 at 37.993 kb on + strand, within GFF2384 at 37.993 kb on + strand, within GFF2384 at 37.993 kb on + strand, within GFF2384 at 37.993 kb on + strand, within GFF2384 at 37.993 kb on + strand, within GFF2384 at 37.994 kb on - strand, within GFF2384 at 37.994 kb on - strand, within GFF2384 at 37.994 kb on - strand, within GFF2384 at 37.994 kb on - strand, within GFF2384 at 37.994 kb on - strand, within GFF2384 at 38.037 kb on + strand, within GFF2384 at 38.037 kb on + strand, within GFF2384 at 38.038 kb on - strand, within GFF2384 at 38.038 kb on - strand, within GFF2384 at 38.197 kb on + strand, within GFF2384 at 38.197 kb on + strand, within GFF2384 at 38.197 kb on + strand, within GFF2384 at 38.227 kb on + strand, within GFF2384 at 38.227 kb on + strand, within GFF2384 at 38.347 kb on + strand at 38.348 kb on - strand at 38.348 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 35,494 + GFF2381 0.34 +0.0 35,494 + GFF2381 0.34 +0.7 35,494 + GFF2381 0.34 -1.4 35,495 - GFF2381 0.34 +0.0 35,495 - GFF2381 0.34 -0.3 35,495 - GFF2381 0.34 +0.8 35,686 - GFF2381 0.53 +0.3 35,821 + GFF2381 0.66 +0.2 35,822 - GFF2381 0.67 -2.9 35,951 - GFF2381 0.79 +0.4 36,022 + GFF2381 0.87 +0.2 36,424 + +0.9 36,425 - -1.6 36,489 - -2.3 36,755 + GFF2383 0.27 -0.9 36,755 + GFF2383 0.27 -0.2 36,755 + GFF2383 0.27 -1.7 36,839 + GFF2383 0.35 -0.5 36,839 + GFF2383 0.35 -1.6 36,839 + GFF2383 0.35 -1.3 36,839 + GFF2383 0.35 -2.3 36,840 - GFF2383 0.36 -1.7 36,840 - GFF2383 0.36 -1.3 36,840 - GFF2383 0.36 -0.5 36,840 - GFF2383 0.36 -0.6 36,840 - GFF2383 0.36 -1.5 37,265 + GFF2383 0.76 -2.2 37,265 + GFF2383 0.76 -0.9 37,266 - GFF2383 0.76 -2.2 37,266 - GFF2383 0.76 +0.3 37,266 - GFF2383 0.76 -1.3 37,266 - GFF2383 0.76 -0.6 37,300 + GFF2383 0.80 -2.5 37,618 + GFF2384 0.12 -0.8 37,618 + GFF2384 0.12 -0.4 37,627 + GFF2384 0.13 -1.8 37,627 + GFF2384 0.13 -0.8 37,954 + GFF2384 0.48 -0.4 37,993 + GFF2384 0.52 +0.0 37,993 + GFF2384 0.52 -0.7 37,993 + GFF2384 0.52 -0.9 37,993 + GFF2384 0.52 -1.2 37,993 + GFF2384 0.52 -0.4 37,994 - GFF2384 0.52 -0.6 37,994 - GFF2384 0.52 +0.6 37,994 - GFF2384 0.52 -1.9 37,994 - GFF2384 0.52 -0.3 37,994 - GFF2384 0.52 -0.9 38,037 + GFF2384 0.57 -0.6 38,037 + GFF2384 0.57 -0.4 38,038 - GFF2384 0.57 -0.9 38,038 - GFF2384 0.57 -0.2 38,197 + GFF2384 0.74 -0.6 38,197 + GFF2384 0.74 +0.4 38,197 + GFF2384 0.74 -1.5 38,227 + GFF2384 0.77 +0.1 38,227 + GFF2384 0.77 -0.7 38,347 + -0.9 38,348 - -2.2 38,348 - -1.3
Or see this region's nucleotide sequence