Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2285 and GFF2286 are separated by 188 nucleotides GFF2286 and GFF2287 are separated by 61 nucleotides GFF2287 and GFF2288 are separated by 14 nucleotides
GFF2285 - Sensor histidine kinase RegB, at 992,507 to 993,847
GFF2285
GFF2286 - hypothetical protein, at 994,036 to 995,460
GFF2286
GFF2287 - hypothetical protein, at 995,522 to 996,292
GFF2287
GFF2288 - Inner membrane protein YqjF, at 996,307 to 996,714
GFF2288
Position (kb) 994
995
996 Strain fitness (log2 ratio) -1
0
1 at 993.112 kb on + strand, within GFF2285 at 993.520 kb on - strand, within GFF2285 at 993.572 kb on - strand, within GFF2285 at 993.830 kb on + strand at 993.853 kb on - strand at 993.901 kb on + strand at 993.910 kb on + strand at 993.910 kb on + strand at 993.911 kb on - strand at 994.117 kb on + strand at 994.117 kb on + strand at 994.118 kb on - strand at 994.129 kb on + strand at 994.129 kb on + strand at 994.290 kb on + strand, within GFF2286 at 994.504 kb on + strand, within GFF2286 at 994.504 kb on + strand, within GFF2286 at 994.571 kb on - strand, within GFF2286 at 994.571 kb on - strand, within GFF2286 at 994.579 kb on + strand, within GFF2286 at 994.852 kb on + strand, within GFF2286 at 994.853 kb on - strand, within GFF2286 at 994.991 kb on - strand, within GFF2286 at 995.254 kb on + strand, within GFF2286 at 995.933 kb on + strand, within GFF2287 at 995.933 kb on + strand, within GFF2287 at 995.934 kb on - strand, within GFF2287 at 995.934 kb on - strand, within GFF2287 at 995.934 kb on - strand, within GFF2287 at 995.934 kb on - strand, within GFF2287 at 995.935 kb on + strand, within GFF2287 at 995.935 kb on + strand, within GFF2287 at 995.936 kb on - strand, within GFF2287 at 996.006 kb on - strand, within GFF2287 at 996.006 kb on - strand, within GFF2287 at 996.006 kb on - strand, within GFF2287 at 996.359 kb on + strand, within GFF2288 at 996.360 kb on - strand, within GFF2288
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 993,112 + GFF2285 0.45 +0.1 993,520 - GFF2285 0.76 -0.4 993,572 - GFF2285 0.79 -1.0 993,830 + +1.3 993,853 - +0.6 993,901 + -0.9 993,910 + -0.0 993,910 + +0.4 993,911 - -1.2 994,117 + +0.0 994,117 + -0.2 994,118 - -0.3 994,129 + +1.0 994,129 + -0.8 994,290 + GFF2286 0.18 +1.3 994,504 + GFF2286 0.33 +1.1 994,504 + GFF2286 0.33 -0.0 994,571 - GFF2286 0.38 -0.7 994,571 - GFF2286 0.38 +0.5 994,579 + GFF2286 0.38 -1.5 994,852 + GFF2286 0.57 -1.7 994,853 - GFF2286 0.57 +0.1 994,991 - GFF2286 0.67 +0.0 995,254 + GFF2286 0.85 -1.6 995,933 + GFF2287 0.53 +0.3 995,933 + GFF2287 0.53 -0.6 995,934 - GFF2287 0.53 +0.8 995,934 - GFF2287 0.53 +0.8 995,934 - GFF2287 0.53 -0.7 995,934 - GFF2287 0.53 +0.5 995,935 + GFF2287 0.54 +1.0 995,935 + GFF2287 0.54 +0.1 995,936 - GFF2287 0.54 +0.2 996,006 - GFF2287 0.63 +0.8 996,006 - GFF2287 0.63 +1.1 996,006 - GFF2287 0.63 +0.4 996,359 + GFF2288 0.13 +1.5 996,360 - GFF2288 0.13 -0.3
Or see this region's nucleotide sequence