Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2077 and GFF2078 are separated by 246 nucleotides GFF2078 and GFF2079 are separated by 70 nucleotides GFF2079 and GFF2080 are separated by 304 nucleotides
GFF2077 - Protein adenylyltransferase SelO, at 757,353 to 758,864
GFF2077
GFF2078 - 60 kDa chaperonin 5, at 759,111 to 760,757
GFF2078
GFF2079 - 10 kDa chaperonin 1, at 760,828 to 761,118
GFF2079
GFF2080 - hypothetical protein, at 761,423 to 761,962
GFF2080
Position (kb) 759
760
761 Strain fitness (log2 ratio) -1
0
1 at 758.196 kb on + strand, within GFF2077 at 758.196 kb on + strand, within GFF2077 at 758.197 kb on - strand, within GFF2077 at 758.197 kb on - strand, within GFF2077 at 758.242 kb on - strand, within GFF2077 at 758.247 kb on + strand, within GFF2077 at 758.248 kb on - strand, within GFF2077 at 758.248 kb on - strand, within GFF2077 at 758.382 kb on + strand, within GFF2077 at 758.383 kb on - strand, within GFF2077 at 758.392 kb on - strand, within GFF2077 at 758.784 kb on + strand at 758.784 kb on + strand at 758.785 kb on - strand at 758.785 kb on - strand at 759.301 kb on + strand, within GFF2078 at 759.302 kb on - strand, within GFF2078 at 759.302 kb on - strand, within GFF2078 at 759.302 kb on - strand, within GFF2078 at 759.302 kb on - strand, within GFF2078 at 759.302 kb on - strand, within GFF2078 at 759.302 kb on - strand, within GFF2078 at 759.679 kb on + strand, within GFF2078 at 759.679 kb on + strand, within GFF2078 at 759.776 kb on - strand, within GFF2078 at 760.151 kb on - strand, within GFF2078 at 760.151 kb on - strand, within GFF2078 at 760.162 kb on + strand, within GFF2078 at 760.769 kb on + strand at 760.770 kb on - strand at 760.815 kb on - strand at 761.127 kb on - strand at 761.205 kb on + strand at 761.206 kb on - strand at 761.254 kb on + strand at 761.254 kb on + strand at 761.255 kb on - strand at 761.255 kb on - strand at 761.255 kb on - strand at 761.357 kb on + strand at 761.357 kb on + strand at 761.357 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 758,196 + GFF2077 0.56 +0.3 758,196 + GFF2077 0.56 +0.6 758,197 - GFF2077 0.56 -0.4 758,197 - GFF2077 0.56 +1.4 758,242 - GFF2077 0.59 +0.3 758,247 + GFF2077 0.59 -0.2 758,248 - GFF2077 0.59 -0.7 758,248 - GFF2077 0.59 +0.4 758,382 + GFF2077 0.68 -0.8 758,383 - GFF2077 0.68 +0.7 758,392 - GFF2077 0.69 -0.3 758,784 + -0.4 758,784 + -0.4 758,785 - +0.4 758,785 - -0.7 759,301 + GFF2078 0.12 +0.0 759,302 - GFF2078 0.12 -0.0 759,302 - GFF2078 0.12 -0.8 759,302 - GFF2078 0.12 -0.0 759,302 - GFF2078 0.12 +0.6 759,302 - GFF2078 0.12 -0.2 759,302 - GFF2078 0.12 +1.3 759,679 + GFF2078 0.34 -0.1 759,679 + GFF2078 0.34 -0.2 759,776 - GFF2078 0.40 +0.9 760,151 - GFF2078 0.63 +0.7 760,151 - GFF2078 0.63 -0.4 760,162 + GFF2078 0.64 -0.0 760,769 + -0.7 760,770 - -0.6 760,815 - -1.3 761,127 - +0.1 761,205 + -0.3 761,206 - -0.6 761,254 + +0.1 761,254 + +1.7 761,255 - -0.7 761,255 - -0.7 761,255 - +0.4 761,357 + +0.1 761,357 + -1.3 761,357 + -0.1
Or see this region's nucleotide sequence