Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1761 and GFF1762 are separated by 30 nucleotides GFF1762 and GFF1763 overlap by 4 nucleotides GFF1763 and GFF1764 overlap by 4 nucleotides GFF1764 and GFF1765 are separated by 3 nucleotides
GFF1761 - hypothetical protein, at 412,753 to 413,763
GFF1761
GFF1762 - hypothetical protein, at 413,794 to 414,204
GFF1762
GFF1763 - D-inositol-3-phosphate glycosyltransferase, at 414,201 to 415,259
GFF1763
GFF1764 - hypothetical protein, at 415,256 to 416,122
GFF1764
GFF1765 - hypothetical protein, at 416,126 to 417,049
GFF1765
Position (kb) 414
415
416 Strain fitness (log2 ratio) -2
-1
0
1 at 413.269 kb on + strand, within GFF1761 at 413.509 kb on + strand, within GFF1761 at 413.684 kb on - strand at 413.712 kb on + strand at 413.713 kb on - strand at 413.755 kb on + strand at 413.755 kb on + strand at 413.756 kb on - strand at 413.797 kb on + strand at 413.797 kb on + strand at 413.798 kb on - strand at 413.804 kb on + strand at 413.908 kb on + strand, within GFF1762 at 413.908 kb on + strand, within GFF1762 at 413.996 kb on - strand, within GFF1762 at 414.036 kb on + strand, within GFF1762 at 414.037 kb on - strand, within GFF1762 at 414.037 kb on - strand, within GFF1762 at 414.176 kb on - strand at 414.176 kb on - strand at 414.271 kb on - strand at 414.271 kb on - strand at 414.418 kb on + strand, within GFF1763 at 414.639 kb on + strand, within GFF1763 at 414.939 kb on + strand, within GFF1763 at 414.940 kb on - strand, within GFF1763 at 414.940 kb on - strand, within GFF1763 at 414.940 kb on - strand, within GFF1763 at 414.940 kb on - strand, within GFF1763 at 414.940 kb on - strand, within GFF1763 at 414.940 kb on - strand, within GFF1763 at 414.940 kb on - strand, within GFF1763 at 414.975 kb on + strand, within GFF1763 at 414.975 kb on + strand, within GFF1763 at 414.975 kb on + strand, within GFF1763 at 414.975 kb on + strand, within GFF1763 at 414.975 kb on + strand, within GFF1763 at 414.975 kb on + strand, within GFF1763 at 414.976 kb on - strand, within GFF1763 at 414.976 kb on - strand, within GFF1763 at 414.984 kb on + strand, within GFF1763 at 415.426 kb on + strand, within GFF1764 at 415.473 kb on + strand, within GFF1764 at 415.679 kb on + strand, within GFF1764 at 415.680 kb on - strand, within GFF1764 at 415.917 kb on - strand, within GFF1764
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 413,269 + GFF1761 0.51 -2.1 413,509 + GFF1761 0.75 +0.2 413,684 - -1.2 413,712 + +0.4 413,713 - -0.9 413,755 + +1.3 413,755 + +0.5 413,756 - +0.9 413,797 + -1.1 413,797 + -1.7 413,798 - -0.3 413,804 + +0.4 413,908 + GFF1762 0.28 -0.6 413,908 + GFF1762 0.28 +0.5 413,996 - GFF1762 0.49 -0.0 414,036 + GFF1762 0.59 -0.4 414,037 - GFF1762 0.59 -0.9 414,037 - GFF1762 0.59 -0.1 414,176 - -0.9 414,176 - -0.9 414,271 - -0.5 414,271 - -2.0 414,418 + GFF1763 0.20 +0.0 414,639 + GFF1763 0.41 -0.3 414,939 + GFF1763 0.70 -0.7 414,940 - GFF1763 0.70 +0.8 414,940 - GFF1763 0.70 -0.6 414,940 - GFF1763 0.70 -0.1 414,940 - GFF1763 0.70 +0.6 414,940 - GFF1763 0.70 +0.3 414,940 - GFF1763 0.70 +0.9 414,940 - GFF1763 0.70 -1.7 414,975 + GFF1763 0.73 +1.4 414,975 + GFF1763 0.73 -0.4 414,975 + GFF1763 0.73 +1.6 414,975 + GFF1763 0.73 +0.2 414,975 + GFF1763 0.73 -0.3 414,975 + GFF1763 0.73 -0.3 414,976 - GFF1763 0.73 +0.2 414,976 - GFF1763 0.73 -0.2 414,984 + GFF1763 0.74 +0.5 415,426 + GFF1764 0.20 -0.4 415,473 + GFF1764 0.25 +0.1 415,679 + GFF1764 0.49 +0.5 415,680 - GFF1764 0.49 +0.6 415,917 - GFF1764 0.76 +0.5
Or see this region's nucleotide sequence