Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1696 and GFF1697 are separated by 27 nucleotides GFF1697 and GFF1698 are separated by 7 nucleotides GFF1698 and GFF1699 overlap by 4 nucleotides
GFF1696 - 1-deoxy-11-beta-hydroxypentalenate dehydrogenase, at 346,135 to 346,986
GFF1696
GFF1697 - Aromatic amino acid exporter YddG, at 347,014 to 347,868
GFF1697
GFF1698 - CTP pyrophosphohydrolase, at 347,876 to 348,280
GFF1698
GFF1699 - Arginine biosynthesis bifunctional protein ArgJ, at 348,277 to 349,518
GFF1699
Position (kb) 347
348 Strain fitness (log2 ratio) -1
0
1 at 346.024 kb on - strand at 346.085 kb on + strand at 346.132 kb on + strand at 346.173 kb on - strand at 346.286 kb on + strand, within GFF1696 at 346.286 kb on + strand, within GFF1696 at 346.286 kb on + strand, within GFF1696 at 346.286 kb on + strand, within GFF1696 at 346.286 kb on + strand, within GFF1696 at 346.287 kb on - strand, within GFF1696 at 346.287 kb on - strand, within GFF1696 at 346.502 kb on + strand, within GFF1696 at 346.502 kb on + strand, within GFF1696 at 346.503 kb on - strand, within GFF1696 at 346.758 kb on + strand, within GFF1696 at 346.758 kb on + strand, within GFF1696 at 347.136 kb on - strand, within GFF1697 at 347.136 kb on - strand, within GFF1697 at 347.192 kb on + strand, within GFF1697 at 347.193 kb on - strand, within GFF1697 at 347.193 kb on - strand, within GFF1697 at 347.374 kb on - strand, within GFF1697 at 347.415 kb on - strand, within GFF1697 at 347.415 kb on - strand, within GFF1697 at 347.577 kb on - strand, within GFF1697 at 347.577 kb on - strand, within GFF1697 at 347.670 kb on - strand, within GFF1697 at 348.051 kb on + strand, within GFF1698
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 346,024 - +0.5 346,085 + +0.4 346,132 + -0.4 346,173 - +1.0 346,286 + GFF1696 0.18 -0.4 346,286 + GFF1696 0.18 +0.5 346,286 + GFF1696 0.18 +0.2 346,286 + GFF1696 0.18 -0.5 346,286 + GFF1696 0.18 -0.2 346,287 - GFF1696 0.18 -0.4 346,287 - GFF1696 0.18 +0.0 346,502 + GFF1696 0.43 +0.9 346,502 + GFF1696 0.43 +0.6 346,503 - GFF1696 0.43 +0.0 346,758 + GFF1696 0.73 -1.0 346,758 + GFF1696 0.73 +0.7 347,136 - GFF1697 0.14 +0.8 347,136 - GFF1697 0.14 +0.0 347,192 + GFF1697 0.21 -0.4 347,193 - GFF1697 0.21 +1.2 347,193 - GFF1697 0.21 +1.1 347,374 - GFF1697 0.42 +0.9 347,415 - GFF1697 0.47 -1.4 347,415 - GFF1697 0.47 -1.2 347,577 - GFF1697 0.66 -0.2 347,577 - GFF1697 0.66 +0.9 347,670 - GFF1697 0.77 -0.9 348,051 + GFF1698 0.43 -0.7
Or see this region's nucleotide sequence