Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1492 and GFF1493 overlap by 17 nucleotides GFF1493 and GFF1494 overlap by 4 nucleotides GFF1494 and GFF1495 are separated by 7 nucleotides
GFF1492 - hypothetical protein, at 130,957 to 131,586
GFF1492
GFF1493 - hypothetical protein, at 131,570 to 132,523
GFF1493
GFF1494 - N-carbamoyl-L-amino-acid hydrolase, at 132,520 to 133,767
GFF1494
GFF1495 - 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxonon atrienedioate hydrolase, at 133,775 to 134,680
GFF1495
Position (kb) 132
133
134 Strain fitness (log2 ratio) -2
-1
0
1 at 131.607 kb on + strand at 131.935 kb on - strand, within GFF1493 at 131.935 kb on - strand, within GFF1493 at 131.941 kb on + strand, within GFF1493 at 131.974 kb on - strand, within GFF1493 at 131.974 kb on - strand, within GFF1493 at 132.183 kb on + strand, within GFF1493 at 132.183 kb on + strand, within GFF1493 at 132.184 kb on - strand, within GFF1493 at 132.184 kb on - strand, within GFF1493 at 132.423 kb on + strand, within GFF1493 at 132.647 kb on + strand, within GFF1494 at 133.010 kb on + strand, within GFF1494 at 133.203 kb on - strand, within GFF1494 at 133.409 kb on - strand, within GFF1494 at 133.447 kb on + strand, within GFF1494 at 133.490 kb on + strand, within GFF1494 at 133.903 kb on + strand, within GFF1495 at 133.903 kb on + strand, within GFF1495 at 133.959 kb on + strand, within GFF1495 at 133.960 kb on - strand, within GFF1495 at 134.191 kb on - strand, within GFF1495 at 134.262 kb on + strand, within GFF1495 at 134.262 kb on + strand, within GFF1495 at 134.262 kb on + strand, within GFF1495 at 134.451 kb on + strand, within GFF1495 at 134.451 kb on + strand, within GFF1495 at 134.451 kb on + strand, within GFF1495 at 134.502 kb on + strand, within GFF1495 at 134.502 kb on + strand, within GFF1495 at 134.503 kb on - strand, within GFF1495 at 134.650 kb on + strand at 134.673 kb on + strand at 134.673 kb on + strand at 134.673 kb on + strand at 134.674 kb on - strand at 134.674 kb on - strand at 134.674 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 131,607 + -0.2 131,935 - GFF1493 0.38 +0.1 131,935 - GFF1493 0.38 -1.2 131,941 + GFF1493 0.39 -1.8 131,974 - GFF1493 0.42 -0.5 131,974 - GFF1493 0.42 +1.0 132,183 + GFF1493 0.64 -0.9 132,183 + GFF1493 0.64 +0.6 132,184 - GFF1493 0.64 +0.8 132,184 - GFF1493 0.64 -0.1 132,423 + GFF1493 0.89 +0.3 132,647 + GFF1494 0.10 +1.5 133,010 + GFF1494 0.39 +0.5 133,203 - GFF1494 0.55 -1.3 133,409 - GFF1494 0.71 +0.5 133,447 + GFF1494 0.74 -0.5 133,490 + GFF1494 0.78 -1.0 133,903 + GFF1495 0.14 -0.8 133,903 + GFF1495 0.14 -0.3 133,959 + GFF1495 0.20 -0.1 133,960 - GFF1495 0.20 +0.7 134,191 - GFF1495 0.46 -0.9 134,262 + GFF1495 0.54 -1.2 134,262 + GFF1495 0.54 -0.2 134,262 + GFF1495 0.54 -0.6 134,451 + GFF1495 0.75 +0.3 134,451 + GFF1495 0.75 +0.2 134,451 + GFF1495 0.75 -0.3 134,502 + GFF1495 0.80 +0.4 134,502 + GFF1495 0.80 -0.6 134,503 - GFF1495 0.80 +1.7 134,650 + -0.7 134,673 + +0.1 134,673 + -1.0 134,673 + -1.0 134,674 - -2.2 134,674 - +0.9 134,674 - +1.5
Or see this region's nucleotide sequence