Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1450 and GFF1451 are separated by 175 nucleotides GFF1451 and GFF1452 are separated by 109 nucleotides
GFF1450 - hypothetical protein, at 72,937 to 75,900
GFF1450
GFF1451 - hypothetical protein, at 76,076 to 76,570
GFF1451
GFF1452 - hypothetical protein, at 76,680 to 81,659
GFF1452
Position (kb) 76
77 Strain fitness (log2 ratio) -2
-1
0
1
2 at 75.609 kb on - strand at 75.714 kb on + strand at 75.715 kb on - strand at 75.728 kb on + strand at 75.834 kb on - strand at 75.884 kb on + strand at 75.885 kb on - strand at 75.935 kb on + strand at 75.942 kb on + strand at 76.001 kb on - strand at 76.018 kb on + strand at 76.019 kb on - strand at 76.023 kb on + strand at 76.227 kb on + strand, within GFF1451 at 76.228 kb on - strand, within GFF1451 at 76.228 kb on - strand, within GFF1451 at 76.233 kb on + strand, within GFF1451 at 76.233 kb on + strand, within GFF1451 at 76.383 kb on + strand, within GFF1451 at 76.384 kb on - strand, within GFF1451 at 76.384 kb on - strand, within GFF1451 at 76.384 kb on - strand, within GFF1451 at 76.384 kb on - strand, within GFF1451 at 76.476 kb on + strand, within GFF1451 at 76.476 kb on + strand, within GFF1451 at 76.477 kb on - strand, within GFF1451 at 76.477 kb on - strand, within GFF1451 at 76.477 kb on - strand, within GFF1451 at 76.477 kb on - strand, within GFF1451 at 76.601 kb on + strand at 76.663 kb on + strand at 76.690 kb on + strand at 76.723 kb on + strand at 76.724 kb on - strand at 76.862 kb on - strand at 76.862 kb on - strand at 76.945 kb on + strand at 76.946 kb on - strand at 77.056 kb on + strand at 77.056 kb on + strand at 77.056 kb on + strand at 77.056 kb on + strand at 77.057 kb on - strand at 77.057 kb on - strand at 77.057 kb on - strand at 77.194 kb on + strand, within GFF1452 at 77.195 kb on - strand, within GFF1452 at 77.195 kb on - strand, within GFF1452 at 77.255 kb on - strand, within GFF1452 at 77.255 kb on - strand, within GFF1452 at 77.255 kb on - strand, within GFF1452 at 77.255 kb on - strand, within GFF1452 at 77.287 kb on + strand, within GFF1452 at 77.335 kb on + strand, within GFF1452 at 77.335 kb on + strand, within GFF1452 at 77.336 kb on - strand, within GFF1452 at 77.422 kb on + strand, within GFF1452 at 77.449 kb on + strand, within GFF1452 at 77.449 kb on + strand, within GFF1452 at 77.449 kb on + strand, within GFF1452 at 77.449 kb on + strand, within GFF1452 at 77.449 kb on + strand, within GFF1452 at 77.450 kb on - strand, within GFF1452 at 77.450 kb on - strand, within GFF1452 at 77.450 kb on - strand, within GFF1452 at 77.450 kb on - strand, within GFF1452 at 77.450 kb on - strand, within GFF1452 at 77.455 kb on + strand, within GFF1452 at 77.456 kb on - strand, within GFF1452 at 77.456 kb on - strand, within GFF1452
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 75,609 - +0.1 75,714 + -0.1 75,715 - -0.1 75,728 + +0.8 75,834 - -1.3 75,884 + -0.9 75,885 - +0.8 75,935 + -1.0 75,942 + -0.1 76,001 - -0.8 76,018 + +0.8 76,019 - +0.5 76,023 + -2.0 76,227 + GFF1451 0.31 +0.9 76,228 - GFF1451 0.31 +0.1 76,228 - GFF1451 0.31 -0.4 76,233 + GFF1451 0.32 +0.7 76,233 + GFF1451 0.32 +0.7 76,383 + GFF1451 0.62 +0.6 76,384 - GFF1451 0.62 -1.0 76,384 - GFF1451 0.62 -0.0 76,384 - GFF1451 0.62 -0.3 76,384 - GFF1451 0.62 -0.5 76,476 + GFF1451 0.81 +0.6 76,476 + GFF1451 0.81 +0.5 76,477 - GFF1451 0.81 +0.5 76,477 - GFF1451 0.81 -0.0 76,477 - GFF1451 0.81 -0.3 76,477 - GFF1451 0.81 -1.3 76,601 + +0.4 76,663 + -0.3 76,690 + -0.1 76,723 + +0.2 76,724 - +0.6 76,862 - -1.2 76,862 - -1.8 76,945 + -0.5 76,946 - -0.6 77,056 + +1.6 77,056 + +0.1 77,056 + +0.2 77,056 + -0.0 77,057 - -2.3 77,057 - -0.1 77,057 - -0.3 77,194 + GFF1452 0.10 +0.3 77,195 - GFF1452 0.10 -1.0 77,195 - GFF1452 0.10 -1.5 77,255 - GFF1452 0.12 +0.2 77,255 - GFF1452 0.12 -0.1 77,255 - GFF1452 0.12 -0.4 77,255 - GFF1452 0.12 +1.4 77,287 + GFF1452 0.12 +1.1 77,335 + GFF1452 0.13 -0.0 77,335 + GFF1452 0.13 -1.6 77,336 - GFF1452 0.13 -0.2 77,422 + GFF1452 0.15 -1.2 77,449 + GFF1452 0.15 -1.5 77,449 + GFF1452 0.15 +2.1 77,449 + GFF1452 0.15 -1.4 77,449 + GFF1452 0.15 -0.2 77,449 + GFF1452 0.15 -1.0 77,450 - GFF1452 0.15 +1.1 77,450 - GFF1452 0.15 -2.2 77,450 - GFF1452 0.15 -1.3 77,450 - GFF1452 0.15 -2.1 77,450 - GFF1452 0.15 +0.2 77,455 + GFF1452 0.16 +0.3 77,456 - GFF1452 0.16 +0.7 77,456 - GFF1452 0.16 -0.3
Or see this region's nucleotide sequence