Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1442 and GFF1443 are separated by 57 nucleotides GFF1443 and GFF1444 overlap by 4 nucleotides GFF1444 and GFF1445 are separated by 22 nucleotides
GFF1442 - putative FAD-linked oxidoreductase, at 65,274 to 66,698
GFF1442
GFF1443 - Hydroxyquinol 1,2-dioxygenase, at 66,756 to 67,637
GFF1443
GFF1444 - 2-(hydroxymethyl)glutarate dehydrogenase, at 67,634 to 68,551
GFF1444
GFF1445 - Melamine deaminase, at 68,574 to 69,938
GFF1445
Position (kb) 67
68
69 Strain fitness (log2 ratio) -2
-1
0
1 at 66.686 kb on + strand at 66.687 kb on - strand at 66.687 kb on - strand at 66.687 kb on - strand at 66.806 kb on - strand at 66.925 kb on + strand, within GFF1443 at 66.993 kb on + strand, within GFF1443 at 66.993 kb on + strand, within GFF1443 at 66.994 kb on - strand, within GFF1443 at 66.994 kb on - strand, within GFF1443 at 67.070 kb on - strand, within GFF1443 at 67.168 kb on + strand, within GFF1443 at 67.168 kb on + strand, within GFF1443 at 67.169 kb on - strand, within GFF1443 at 67.171 kb on + strand, within GFF1443 at 67.171 kb on + strand, within GFF1443 at 67.171 kb on + strand, within GFF1443 at 67.172 kb on - strand, within GFF1443 at 67.172 kb on - strand, within GFF1443 at 67.286 kb on + strand, within GFF1443 at 67.324 kb on + strand, within GFF1443 at 67.325 kb on - strand, within GFF1443 at 67.325 kb on - strand, within GFF1443 at 67.756 kb on - strand, within GFF1444 at 67.896 kb on + strand, within GFF1444 at 67.896 kb on + strand, within GFF1444 at 67.897 kb on - strand, within GFF1444 at 67.897 kb on - strand, within GFF1444 at 67.897 kb on - strand, within GFF1444 at 68.043 kb on + strand, within GFF1444 at 68.070 kb on + strand, within GFF1444 at 68.070 kb on + strand, within GFF1444 at 68.202 kb on + strand, within GFF1444 at 68.542 kb on + strand at 68.543 kb on - strand at 68.543 kb on - strand at 68.951 kb on + strand, within GFF1445 at 68.951 kb on + strand, within GFF1445 at 69.103 kb on + strand, within GFF1445 at 69.364 kb on - strand, within GFF1445 at 69.542 kb on + strand, within GFF1445 at 69.542 kb on + strand, within GFF1445 at 69.542 kb on + strand, within GFF1445 at 69.542 kb on + strand, within GFF1445
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 66,686 + -0.6 66,687 - -0.1 66,687 - +1.1 66,687 - +0.2 66,806 - -0.3 66,925 + GFF1443 0.19 -0.8 66,993 + GFF1443 0.27 -1.0 66,993 + GFF1443 0.27 -1.0 66,994 - GFF1443 0.27 +0.8 66,994 - GFF1443 0.27 +0.2 67,070 - GFF1443 0.36 +0.4 67,168 + GFF1443 0.47 +0.1 67,168 + GFF1443 0.47 -0.6 67,169 - GFF1443 0.47 +0.2 67,171 + GFF1443 0.47 +0.3 67,171 + GFF1443 0.47 +0.2 67,171 + GFF1443 0.47 -0.2 67,172 - GFF1443 0.47 -1.9 67,172 - GFF1443 0.47 +0.1 67,286 + GFF1443 0.60 +0.5 67,324 + GFF1443 0.64 -0.3 67,325 - GFF1443 0.65 +0.4 67,325 - GFF1443 0.65 -1.2 67,756 - GFF1444 0.13 +0.6 67,896 + GFF1444 0.29 -0.6 67,896 + GFF1444 0.29 +1.7 67,897 - GFF1444 0.29 -1.4 67,897 - GFF1444 0.29 -0.0 67,897 - GFF1444 0.29 +1.3 68,043 + GFF1444 0.45 -1.1 68,070 + GFF1444 0.47 -0.1 68,070 + GFF1444 0.47 +0.5 68,202 + GFF1444 0.62 -0.9 68,542 + -0.2 68,543 - +0.2 68,543 - -0.6 68,951 + GFF1445 0.28 -0.4 68,951 + GFF1445 0.28 -1.0 69,103 + GFF1445 0.39 -1.1 69,364 - GFF1445 0.58 +1.1 69,542 + GFF1445 0.71 +0.7 69,542 + GFF1445 0.71 -0.1 69,542 + GFF1445 0.71 -1.1 69,542 + GFF1445 0.71 -0.8
Or see this region's nucleotide sequence