Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1198 and GFF1199 are separated by 9 nucleotides GFF1199 and GFF1200 are separated by 13 nucleotides GFF1200 and GFF1201 are separated by 16 nucleotides GFF1201 and GFF1202 are separated by 116 nucleotides
GFF1198 - putative glycosyltransferase, at 1,297,476 to 1,298,216
GFF1198
GFF1199 - Purine nucleoside phosphorylase DeoD-type, at 1,298,226 to 1,299,116
GFF1199
GFF1200 - Methylthioribose kinase, at 1,299,130 to 1,300,392
GFF1200
GFF1201 - hypothetical protein, at 1,300,409 to 1,300,879
GFF1201
GFF1202 - Putative protein-methionine-sulfoxide reductase subunit YedZ1, at 1,300,996 to 1,301,661
GFF1202
Position (kb) 1299
1300
1301 Strain fitness (log2 ratio) -2
-1
0
1 at 1298.460 kb on + strand, within GFF1199 at 1298.460 kb on + strand, within GFF1199 at 1298.460 kb on + strand, within GFF1199 at 1298.460 kb on + strand, within GFF1199 at 1298.460 kb on + strand, within GFF1199 at 1298.461 kb on - strand, within GFF1199 at 1298.461 kb on - strand, within GFF1199 at 1298.461 kb on - strand, within GFF1199 at 1298.509 kb on - strand, within GFF1199 at 1298.566 kb on - strand, within GFF1199 at 1298.682 kb on + strand, within GFF1199 at 1298.682 kb on + strand, within GFF1199 at 1298.683 kb on - strand, within GFF1199 at 1298.683 kb on - strand, within GFF1199 at 1298.683 kb on - strand, within GFF1199 at 1298.683 kb on - strand, within GFF1199 at 1298.727 kb on + strand, within GFF1199 at 1298.727 kb on + strand, within GFF1199 at 1298.727 kb on + strand, within GFF1199 at 1298.728 kb on - strand, within GFF1199 at 1298.728 kb on - strand, within GFF1199 at 1298.728 kb on - strand, within GFF1199 at 1298.733 kb on + strand, within GFF1199 at 1298.733 kb on + strand, within GFF1199 at 1298.734 kb on - strand, within GFF1199 at 1299.148 kb on + strand at 1299.149 kb on - strand at 1299.149 kb on - strand at 1299.149 kb on - strand at 1299.149 kb on - strand at 1299.149 kb on - strand at 1299.326 kb on - strand, within GFF1200 at 1299.556 kb on + strand, within GFF1200 at 1299.898 kb on + strand, within GFF1200 at 1299.926 kb on + strand, within GFF1200 at 1299.926 kb on + strand, within GFF1200 at 1299.926 kb on + strand, within GFF1200 at 1299.926 kb on + strand, within GFF1200 at 1299.927 kb on - strand, within GFF1200 at 1299.927 kb on - strand, within GFF1200 at 1299.927 kb on - strand, within GFF1200 at 1300.783 kb on + strand, within GFF1201 at 1300.783 kb on + strand, within GFF1201 at 1300.783 kb on + strand, within GFF1201 at 1300.784 kb on - strand, within GFF1201 at 1300.784 kb on - strand, within GFF1201 at 1301.227 kb on + strand, within GFF1202 at 1301.228 kb on - strand, within GFF1202 at 1301.354 kb on - strand, within GFF1202 at 1301.354 kb on - strand, within GFF1202 at 1301.354 kb on - strand, within GFF1202 at 1301.377 kb on + strand, within GFF1202 at 1301.377 kb on + strand, within GFF1202 at 1301.377 kb on + strand, within GFF1202 at 1301.377 kb on + strand, within GFF1202 at 1301.377 kb on + strand, within GFF1202 at 1301.378 kb on - strand, within GFF1202 at 1301.378 kb on - strand, within GFF1202
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 1,298,460 + GFF1199 0.26 +1.0 1,298,460 + GFF1199 0.26 +0.1 1,298,460 + GFF1199 0.26 +0.3 1,298,460 + GFF1199 0.26 -1.3 1,298,460 + GFF1199 0.26 -0.1 1,298,461 - GFF1199 0.26 +0.7 1,298,461 - GFF1199 0.26 -0.0 1,298,461 - GFF1199 0.26 +0.3 1,298,509 - GFF1199 0.32 -0.2 1,298,566 - GFF1199 0.38 -1.2 1,298,682 + GFF1199 0.51 -0.5 1,298,682 + GFF1199 0.51 +0.1 1,298,683 - GFF1199 0.51 -0.5 1,298,683 - GFF1199 0.51 -0.9 1,298,683 - GFF1199 0.51 -0.4 1,298,683 - GFF1199 0.51 +1.1 1,298,727 + GFF1199 0.56 +0.6 1,298,727 + GFF1199 0.56 -2.0 1,298,727 + GFF1199 0.56 -0.6 1,298,728 - GFF1199 0.56 +0.0 1,298,728 - GFF1199 0.56 -0.0 1,298,728 - GFF1199 0.56 +0.1 1,298,733 + GFF1199 0.57 -1.1 1,298,733 + GFF1199 0.57 +0.0 1,298,734 - GFF1199 0.57 -0.8 1,299,148 + -0.7 1,299,149 - +0.6 1,299,149 - -0.4 1,299,149 - -0.5 1,299,149 - +0.5 1,299,149 - +0.5 1,299,326 - GFF1200 0.16 +0.6 1,299,556 + GFF1200 0.34 -1.0 1,299,898 + GFF1200 0.61 -0.9 1,299,926 + GFF1200 0.63 -0.3 1,299,926 + GFF1200 0.63 -0.0 1,299,926 + GFF1200 0.63 -0.7 1,299,926 + GFF1200 0.63 +1.3 1,299,927 - GFF1200 0.63 +0.1 1,299,927 - GFF1200 0.63 +0.1 1,299,927 - GFF1200 0.63 +0.4 1,300,783 + GFF1201 0.79 -0.7 1,300,783 + GFF1201 0.79 +0.7 1,300,783 + GFF1201 0.79 +0.3 1,300,784 - GFF1201 0.80 +0.0 1,300,784 - GFF1201 0.80 -0.3 1,301,227 + GFF1202 0.35 -0.1 1,301,228 - GFF1202 0.35 -0.6 1,301,354 - GFF1202 0.54 +1.1 1,301,354 - GFF1202 0.54 -0.1 1,301,354 - GFF1202 0.54 +0.6 1,301,377 + GFF1202 0.57 +0.2 1,301,377 + GFF1202 0.57 +0.6 1,301,377 + GFF1202 0.57 -0.6 1,301,377 + GFF1202 0.57 -0.9 1,301,377 + GFF1202 0.57 -1.2 1,301,378 - GFF1202 0.57 +0.4 1,301,378 - GFF1202 0.57 -0.9
Or see this region's nucleotide sequence