Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03675

Experiment: monoculture; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 5
4,106,319	+		MIT1002_03674	0.11	+1.0
4,106,322	-		MIT1002_03674	0.11	+2.9
4,106,329	-		MIT1002_03674	0.12	+0.6
4,106,351	-		MIT1002_03674	0.14	+0.8
4,106,354	+		MIT1002_03674	0.14	+1.3
4,106,362	-		MIT1002_03674	0.15	+2.0
4,106,409	+		MIT1002_03674	0.20	+0.3
4,106,431	-		MIT1002_03674	0.22	-1.8
4,106,433	+		MIT1002_03674	0.22	+0.5
4,106,442	-		MIT1002_03674	0.23	+1.2
4,106,478	+		MIT1002_03674	0.27	+1.1
4,106,558	-		MIT1002_03674	0.35	+0.7
4,106,574	-		MIT1002_03674	0.37	+0.4
4,106,601	+		MIT1002_03674	0.39	+2.3
4,106,725	+		MIT1002_03674	0.52	-1.1
4,106,742	-		MIT1002_03674	0.54	+1.4
4,106,760	+		MIT1002_03674	0.56	-0.0
4,106,760	+		MIT1002_03674	0.56	+0.8
4,106,855	+		MIT1002_03674	0.65	+0.6
4,106,855	-		MIT1002_03674	0.65	-0.3
4,106,858	+		MIT1002_03674	0.66	-0.2
4,106,878	+		MIT1002_03674	0.68	+1.0
4,106,878	+		MIT1002_03674	0.68	-0.1
4,106,901	+		MIT1002_03674	0.70	-0.2
4,107,079	-		MIT1002_03674	0.88	+2.3
4,107,106	+				+1.6
4,107,109	+				+1.1
4,107,112	-				+0.5
4,107,114	-				+1.8
4,107,119	-				+3.1
4,107,119	-				+1.2
4,107,129	-				-0.5
4,107,129	-				-1.8
4,107,144	+				-0.4
4,107,152	+				+2.1
4,107,173	+				+1.1
4,107,181	-				+0.8
4,107,181	-				+0.4
4,107,205	-				-0.5
4,107,267	-		MIT1002_03675	0.18	-1.0
4,107,276	+		MIT1002_03675	0.20	-0.4
4,107,279	+		MIT1002_03675	0.20	-1.5
4,107,287	-		MIT1002_03675	0.22	-0.3
4,107,318	-		MIT1002_03675	0.29	-0.8
4,107,378	+		MIT1002_03675	0.43	+0.8
4,107,409	-		MIT1002_03675	0.50	-0.6
4,107,423	+		MIT1002_03675	0.53	+0.4
4,107,431	-		MIT1002_03675	0.55	-0.8
4,107,476	+		MIT1002_03675	0.65	+0.8
4,107,545	-		MIT1002_03675	0.81	-0.5
4,107,616	-				-0.2
4,107,745	+				-0.4
4,107,753	-				+0.5
4,107,753	-				+0.4
4,107,753	-				+0.4
4,107,817	-				-1.4
4,107,926	+		MIT1002_03676	0.20	-0.5
4,107,934	-		MIT1002_03676	0.21	+0.9
4,107,944	-		MIT1002_03676	0.22	+1.9
4,107,980	-		MIT1002_03676	0.26	+0.6
4,108,000	-		MIT1002_03676	0.28	+1.2
4,108,000	-		MIT1002_03676	0.28	-2.0
4,108,180	+		MIT1002_03676	0.48	-2.2
4,108,200	+		MIT1002_03676	0.50	-0.2
4,108,200	+		MIT1002_03676	0.50	+0.3
4,108,210	+		MIT1002_03676	0.51	-1.0
4,108,234	+		MIT1002_03676	0.54	-2.2
4,108,274	-		MIT1002_03676	0.58	-1.2
4,108,274	-		MIT1002_03676	0.58	+1.1
4,108,290	-		MIT1002_03676	0.60	+0.7
4,108,298	+		MIT1002_03676	0.61	-0.7
4,108,298	+		MIT1002_03676	0.61	+0.8
4,108,298	+		MIT1002_03676	0.61	-1.1
4,108,439	+		MIT1002_03676	0.76	+0.6
4,108,557	+		MIT1002_03676	0.89	+0.7
4,108,557	+		MIT1002_03676	0.89	-1.4
4,108,557	+		MIT1002_03676	0.89	+0.2
4,108,557	+		MIT1002_03676	0.89	-0.4
4,108,557	+		MIT1002_03676	0.89	+0.5
4,108,565	-		MIT1002_03676	0.90	-0.7
4,108,565	-		MIT1002_03676	0.90	-0.6
4,108,621	-				-0.1