Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03493

Experiment: monoculture; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 5
3,901,948	-				-1.0
3,902,038	+				+1.1
3,902,038	+				+0.6
3,902,086	+				-0.6
3,902,110	+				+0.1
3,902,178	-		MIT1002_03493	0.13	-0.1
3,902,183	+		MIT1002_03493	0.14	+0.5
3,902,215	+		MIT1002_03493	0.21	+0.9
3,902,215	+		MIT1002_03493	0.21	-2.0
3,902,221	+		MIT1002_03493	0.23	-0.0
3,902,320	+		MIT1002_03493	0.44	-1.1
3,902,320	+		MIT1002_03493	0.44	-0.9
3,902,331	+		MIT1002_03493	0.46	-1.1
3,902,376	-		MIT1002_03493	0.56	-0.8
3,902,412	+		MIT1002_03493	0.64	+0.2
3,902,602	+				-0.1
3,902,607	+				-2.0
3,902,614	+				-1.3
3,902,744	+		MIT1002_03494	0.14	+1.0
3,902,744	+		MIT1002_03494	0.14	+1.2
3,902,744	+		MIT1002_03494	0.14	+0.3
3,902,744	+		MIT1002_03494	0.14	-0.8
3,902,744	+		MIT1002_03494	0.14	-0.3
3,902,752	-		MIT1002_03494	0.16	-0.3
3,902,754	+		MIT1002_03494	0.16	-1.0
3,902,754	+		MIT1002_03494	0.16	-1.3
3,902,762	-		MIT1002_03494	0.17	+0.7
3,902,764	-		MIT1002_03494	0.17	-1.2
3,902,764	-		MIT1002_03494	0.17	-0.0
3,902,808	+		MIT1002_03494	0.24	-0.7
3,902,810	-		MIT1002_03494	0.24	+0.8
3,902,816	-		MIT1002_03494	0.25	-1.2
3,902,849	+		MIT1002_03494	0.30	+0.7
3,902,939	-		MIT1002_03494	0.43	+0.2
3,902,971	+		MIT1002_03494	0.48	-0.8
3,902,979	-		MIT1002_03494	0.49	-1.0
3,902,979	-		MIT1002_03494	0.49	-1.0
3,902,979	-		MIT1002_03494	0.49	+1.5
3,903,002	+		MIT1002_03494	0.52	-0.8
3,903,010	+		MIT1002_03494	0.53	-2.3
3,903,010	-		MIT1002_03494	0.53	+0.7
3,903,034	-		MIT1002_03494	0.57	+2.8
3,903,059	-		MIT1002_03494	0.61	-0.1
3,903,082	+		MIT1002_03494	0.64	+2.1
3,903,082	+		MIT1002_03494	0.64	-3.1
3,903,090	-		MIT1002_03494	0.65	+3.1
3,903,090	-		MIT1002_03494	0.65	-1.7
3,903,090	-		MIT1002_03494	0.65	-0.3
3,903,090	-		MIT1002_03494	0.65	+1.8
3,903,135	-		MIT1002_03494	0.72	-0.5
3,903,187	-		MIT1002_03494	0.79	-1.3
3,903,209	+		MIT1002_03494	0.82	-0.2
3,903,225	+		MIT1002_03494	0.85	-0.4
3,903,233	-		MIT1002_03494	0.86	+0.8
3,903,233	-		MIT1002_03494	0.86	+0.7
3,903,235	+		MIT1002_03494	0.86	+0.8
3,903,238	-		MIT1002_03494	0.87	-0.1
3,903,255	-		MIT1002_03494	0.89	+0.2
3,903,394	-				-1.5
3,903,477	+				-0.3
3,903,482	+				+0.8
3,903,484	+				+0.7
3,903,519	-				+0.1
3,903,521	+				-0.5
3,903,527	+				+0.9