Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03306

Experiment: monoculture; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 5
3,687,295	-		MIT1002_03305	0.26	+0.1
3,687,391	+		MIT1002_03305	0.33	-0.0
3,687,391	+		MIT1002_03305	0.33	-1.7
3,687,483	+		MIT1002_03305	0.40	+0.2
3,687,609	+		MIT1002_03305	0.49	-0.3
3,687,609	-		MIT1002_03305	0.49	+1.1
3,687,621	+		MIT1002_03305	0.50	+0.9
3,687,675	+		MIT1002_03305	0.54	-0.9
3,687,852	-		MIT1002_03305	0.67	+0.7
3,687,864	-		MIT1002_03305	0.68	+0.4
3,687,955	+		MIT1002_03305	0.75	-0.9
3,687,963	-		MIT1002_03305	0.76	-3.3
3,688,038	-		MIT1002_03305	0.81	+1.4
3,688,038	-		MIT1002_03305	0.81	-0.4
3,688,045	+		MIT1002_03305	0.82	+2.6
3,688,053	+		MIT1002_03305	0.82	-0.7
3,688,061	-		MIT1002_03305	0.83	-1.5
3,688,115	+		MIT1002_03305	0.87	+1.2
3,688,115	-		MIT1002_03305	0.87	+0.0
3,688,159	+				-0.6
3,688,186	+				-1.0
3,688,206	-				-0.8
3,688,219	+				-1.2
3,688,219	+				+0.4
3,688,228	-				+0.4
3,688,247	+				-1.8
3,688,253	-				-1.7
3,688,333	+				-1.0
3,688,345	+				+0.5
3,688,377	+				-0.3
3,688,385	-				+3.0
3,688,385	-				-0.2
3,688,385	-				+0.4
3,688,449	+		MIT1002_03306	0.11	-0.1
3,688,457	-		MIT1002_03306	0.12	+1.9
3,688,504	-		MIT1002_03306	0.15	+0.3
3,688,551	+		MIT1002_03306	0.18	+1.4
3,688,748	+		MIT1002_03306	0.31	+0.2
3,688,811	-		MIT1002_03306	0.35	+2.3
3,688,811	-		MIT1002_03306	0.35	+0.1
3,688,900	+		MIT1002_03306	0.41	-1.7
3,688,962	-		MIT1002_03306	0.45	-0.3
3,688,962	-		MIT1002_03306	0.45	+0.1
3,689,032	+		MIT1002_03306	0.49	+0.7
3,689,045	-		MIT1002_03306	0.50	-0.8
3,689,105	+		MIT1002_03306	0.54	+0.6
3,689,107	+		MIT1002_03306	0.54	-0.2
3,689,122	+		MIT1002_03306	0.55	-0.3
3,689,130	-		MIT1002_03306	0.55	-0.6
3,689,187	-		MIT1002_03306	0.59	-0.6
3,689,289	-		MIT1002_03306	0.66	-0.8
3,689,494	+		MIT1002_03306	0.79	+0.7
3,689,494	+		MIT1002_03306	0.79	+0.8
3,689,502	-		MIT1002_03306	0.79	+0.1
3,689,507	-		MIT1002_03306	0.80	+0.8
3,689,514	-		MIT1002_03306	0.80	-0.3
3,689,525	-		MIT1002_03306	0.81	-0.7
3,689,525	-		MIT1002_03306	0.81	-1.7
3,689,658	-		MIT1002_03306	0.90	+1.8
3,689,743	+				+1.6
3,689,877	+				-1.8
3,689,892	+				+0.3
3,689,892	+				+0.9
3,689,900	-				-1.2
3,689,911	+				+0.1
3,689,939	+				-1.2
3,689,947	-				+0.3
3,690,165	+		MIT1002_03307	0.28	+0.5
3,690,173	-		MIT1002_03307	0.29	-0.2
3,690,177	+		MIT1002_03307	0.29	-1.2
3,690,185	-		MIT1002_03307	0.30	+1.8
3,690,185	-		MIT1002_03307	0.30	+0.1
3,690,244	+		MIT1002_03307	0.35	-0.2
3,690,248	-		MIT1002_03307	0.36	+0.1
3,690,252	-		MIT1002_03307	0.36	-0.2
3,690,269	+		MIT1002_03307	0.38	+0.1
3,690,326	+		MIT1002_03307	0.43	+2.4
3,690,438	-		MIT1002_03307	0.53	+0.9
3,690,456	+		MIT1002_03307	0.55	+1.3
3,690,456	+		MIT1002_03307	0.55	-1.2
3,690,485	-		MIT1002_03307	0.57	-0.2
3,690,489	-		MIT1002_03307	0.58	+0.3
3,690,503	+		MIT1002_03307	0.59	-2.3
3,690,592	+		MIT1002_03307	0.67	+1.5
3,690,592	+		MIT1002_03307	0.67	-0.3
3,690,592	+		MIT1002_03307	0.67	-0.2
3,690,600	-		MIT1002_03307	0.68	+0.2
3,690,614	+		MIT1002_03307	0.69	-0.9
3,690,648	-		MIT1002_03307	0.72	-0.0
3,690,660	-		MIT1002_03307	0.73	-0.4
3,690,674	-		MIT1002_03307	0.74	+0.4
3,690,776	+		MIT1002_03307	0.83	-0.8
3,690,776	+		MIT1002_03307	0.83	-0.2
3,690,781	+		MIT1002_03307	0.84	-0.1
3,690,781	+		MIT1002_03307	0.84	+0.6
3,690,781	+		MIT1002_03307	0.84	+1.6
3,690,781	+		MIT1002_03307	0.84	+0.3
3,690,781	+		MIT1002_03307	0.84	+0.2
3,690,781	+		MIT1002_03307	0.84	+1.0
3,690,781	+		MIT1002_03307	0.84	+0.8
3,690,781	+		MIT1002_03307	0.84	+2.1
3,690,781	+		MIT1002_03307	0.84	+0.4
3,690,781	+		MIT1002_03307	0.84	-0.0
3,690,781	+		MIT1002_03307	0.84	-0.8
3,690,781	+		MIT1002_03307	0.84	+0.4
3,690,781	+		MIT1002_03307	0.84	-1.6
3,690,781	+		MIT1002_03307	0.84	+0.6
3,690,781	+		MIT1002_03307	0.84	+0.6
3,690,781	-		MIT1002_03307	0.84	-1.9
3,690,784	-		MIT1002_03307	0.84	+0.5
3,690,784	-		MIT1002_03307	0.84	-0.3
3,690,784	-		MIT1002_03307	0.84	-0.5
3,690,789	-		MIT1002_03307	0.85	-0.9
3,690,789	-		MIT1002_03307	0.85	-2.2
3,690,789	-		MIT1002_03307	0.85	-1.2
3,690,789	-		MIT1002_03307	0.85	+0.5
3,690,789	-		MIT1002_03307	0.85	+0.1
3,690,789	-		MIT1002_03307	0.85	+1.1
3,690,789	-		MIT1002_03307	0.85	-1.8
3,690,789	-		MIT1002_03307	0.85	-0.4
3,690,789	-		MIT1002_03307	0.85	+0.3
3,690,791	-		MIT1002_03307	0.85	-0.6
3,690,791	-		MIT1002_03307	0.85	+0.4
3,690,808	-		MIT1002_03307	0.86	+0.1
3,690,810	+		MIT1002_03307	0.87	+0.7