Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03257

Experiment: monoculture; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 5
3,628,585	+				+0.5
3,628,595	+				-0.4
3,628,618	+				+0.8
3,628,674	+				+0.1
3,628,750	+				-1.0
3,628,782	-				+1.0
3,628,811	-				+1.4
3,628,819	+				+0.1
3,628,819	+				-0.0
3,628,819	+				+2.7
3,628,819	+				-0.9
3,628,819	+				+1.0
3,628,827	-				-1.9
3,628,837	-				+0.2
3,628,837	-				+0.5
3,628,874	+				+0.3
3,628,874	+				+0.8
3,628,882	-				-1.4
3,628,882	-				+0.7
3,628,934	+		MIT1002_03256	0.16	+1.0
3,628,934	+		MIT1002_03256	0.16	+0.0
3,628,942	-		MIT1002_03256	0.17	-1.7
3,628,942	-		MIT1002_03256	0.17	+1.6
3,628,942	-		MIT1002_03256	0.17	+0.6
3,628,950	-		MIT1002_03256	0.18	+0.5
3,628,976	+		MIT1002_03256	0.22	-0.2
3,628,988	+		MIT1002_03256	0.23	+2.1
3,628,996	-		MIT1002_03256	0.24	+0.4
3,628,996	-		MIT1002_03256	0.24	+0.7
3,629,023	+		MIT1002_03256	0.28	+0.9
3,629,042	-		MIT1002_03256	0.31	-0.3
3,629,077	+		MIT1002_03256	0.35	+0.1
3,629,094	-		MIT1002_03256	0.38	-0.1
3,629,149	-		MIT1002_03256	0.45	+0.8
3,629,187	-		MIT1002_03256	0.50	+0.2
3,629,194	+		MIT1002_03256	0.51	+0.3
3,629,194	+		MIT1002_03256	0.51	-1.3
3,629,194	+		MIT1002_03256	0.51	-2.1
3,629,202	-		MIT1002_03256	0.52	+0.5
3,629,203	-		MIT1002_03256	0.52	-0.6
3,629,213	+		MIT1002_03256	0.54	+0.0
3,629,213	+		MIT1002_03256	0.54	+1.2
3,629,213	+		MIT1002_03256	0.54	-0.0
3,629,222	-		MIT1002_03256	0.55	+0.6
3,629,351	+		MIT1002_03256	0.72	-0.3
3,629,359	-		MIT1002_03256	0.73	+0.0
3,629,361	+		MIT1002_03256	0.73	-0.4
3,629,462	-		MIT1002_03256	0.87	-0.3
3,629,479	+		MIT1002_03256	0.89	+1.6
3,629,544	+				-0.4
3,629,617	-				+0.6
3,629,620	+				+2.1
3,629,750	+		MIT1002_03257	0.21	-0.6
3,629,750	+		MIT1002_03257	0.21	-0.3
3,629,750	+		MIT1002_03257	0.21	+1.7
3,629,758	-		MIT1002_03257	0.22	+1.5
3,629,758	-		MIT1002_03257	0.22	-0.0
3,629,782	+		MIT1002_03257	0.26	-0.3
3,629,838	-		MIT1002_03257	0.33	-0.0
3,629,889	-		MIT1002_03257	0.39	-0.1
3,629,893	+		MIT1002_03257	0.40	+1.2
3,629,893	+		MIT1002_03257	0.40	-0.7
3,629,981	+		MIT1002_03257	0.51	-2.0
3,629,989	-		MIT1002_03257	0.52	+0.5
3,629,992	+		MIT1002_03257	0.52	+1.9
3,630,125	+		MIT1002_03257	0.69	+1.1
3,630,146	-		MIT1002_03257	0.72	-0.0
3,630,152	+		MIT1002_03257	0.73	-1.2
3,630,160	-		MIT1002_03257	0.74	+3.4
3,630,213	+		MIT1002_03257	0.81	-0.8
3,630,213	+		MIT1002_03257	0.81	+0.4
3,630,247	+		MIT1002_03257	0.85	-1.7
3,630,255	-		MIT1002_03257	0.86	+1.3
3,630,349	+				-0.9
3,630,354	+				-0.3
3,630,354	+				+1.9
3,630,362	-				+0.8
3,630,362	-				+1.9
3,630,403	+				-0.6
3,630,413	-				+2.2
3,630,484	-				+1.6
3,630,542	+				-0.3
3,630,544	+				-0.4
3,630,552	-				-1.2
3,630,558	-				+0.8
3,630,595	+		MIT1002_03258	0.14	+0.6
3,630,595	+		MIT1002_03258	0.14	+0.8
3,630,612	-		MIT1002_03258	0.17	+0.7
3,630,621	-		MIT1002_03258	0.18	-0.3
3,630,781	-		MIT1002_03258	0.42	+0.1
3,630,853	+		MIT1002_03258	0.53	-1.8
3,630,898	+		MIT1002_03258	0.60	-0.0
3,630,906	-		MIT1002_03258	0.61	+0.5
3,630,919	+		MIT1002_03258	0.63	-0.9
3,630,939	+		MIT1002_03258	0.66	+1.7
3,630,939	+		MIT1002_03258	0.66	+1.2
3,630,998	-		MIT1002_03258	0.75	+0.7
3,631,019	+		MIT1002_03258	0.78	-0.8
3,631,045	+		MIT1002_03258	0.82	+1.2
3,631,053	-		MIT1002_03258	0.83	-0.5
3,631,074	-		MIT1002_03258	0.86	-1.3
3,631,160	-				-1.5
3,631,214	-				-0.6
3,631,225	+				+1.2
3,631,248	+				-0.2
3,631,248	+				+0.3
3,631,248	+				-0.5
3,631,297	+				+0.6
3,631,300	-				-1.5
3,631,331	-		MIT1002_03259	0.12	+2.4
3,631,331	-		MIT1002_03259	0.12	-0.5
3,631,331	-		MIT1002_03259	0.12	-1.9