Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03235

Experiment: monoculture; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 5
3,603,324	-		MIT1002_03233	0.81	+1.0
3,603,346	-		MIT1002_03233	0.82	-0.6
3,603,357	-		MIT1002_03233	0.83	-0.5
3,603,363	-		MIT1002_03233	0.84	-0.1
3,603,424	-		MIT1002_03233	0.88	+0.4
3,603,452	-				-1.1
3,603,457	+				+2.1
3,603,492	-				+1.2
3,603,557	-				+0.8
3,603,589	+				+0.4
3,603,589	+				-0.1
3,603,589	+				+1.8
3,603,597	-				-1.5
3,603,597	-				-0.2
3,603,643	+				-0.8
3,603,648	+				+1.0
3,603,648	+				+0.6
3,603,653	+				-0.8
3,603,670	+				-0.4
3,603,732	+				-1.0
3,603,798	+				-0.3
3,603,838	+				-2.1
3,603,838	+				+1.1
3,603,838	+				-2.5
3,603,838	+				-0.9
3,603,846	-				-2.0
3,603,851	+				-0.2
3,603,851	-				-0.9
3,603,887	+				-1.1
3,603,909	+				+0.9
3,603,912	+				+0.6
3,603,914	+				-0.6
3,603,917	-				+0.8
3,603,938	+				-0.4
3,603,943	+				+0.1
3,603,943	+				-0.6
3,603,946	-				+0.4
3,603,946	-				+0.5
3,603,951	-				-1.1
3,603,951	-				+0.2
3,604,043	+				+1.2
3,604,043	+				-0.8
3,604,048	+				-0.3
3,604,051	-				-1.3
3,604,066	-				-0.2
3,604,102	+				+1.4
3,604,102	+				-1.1
3,604,110	-				+1.5
3,604,110	-				-0.4
3,604,112	-				+2.9
3,604,174	+				-1.8
3,604,221	-				+1.7
3,604,361	-		MIT1002_03235	0.27	-1.5
3,604,378	+		MIT1002_03235	0.31	+1.7
3,604,383	+		MIT1002_03235	0.32	+0.9
3,604,386	-		MIT1002_03235	0.32	+1.3
3,604,393	+		MIT1002_03235	0.34	-2.1
3,604,442	+		MIT1002_03235	0.43	-2.7
3,604,442	+		MIT1002_03235	0.43	+1.1
3,604,442	+		MIT1002_03235	0.43	-1.6
3,604,442	+		MIT1002_03235	0.43	+2.5
3,604,450	-		MIT1002_03235	0.44	-0.0
3,604,450	-		MIT1002_03235	0.44	-0.6
3,604,460	-		MIT1002_03235	0.46	+0.8
3,604,488	-		MIT1002_03235	0.52	-0.4
3,604,530	+		MIT1002_03235	0.60	+0.0
3,604,530	+		MIT1002_03235	0.60	-1.2
3,604,538	-		MIT1002_03235	0.61	-1.2
3,604,540	-		MIT1002_03235	0.62	+1.1
3,604,591	-		MIT1002_03235	0.71	+1.8
3,604,641	+		MIT1002_03235	0.81	+0.3
3,604,649	+		MIT1002_03235	0.82	+0.4
3,604,649	-		MIT1002_03235	0.82	+1.1
3,604,651	+		MIT1002_03235	0.83	+0.3
3,604,666	+		MIT1002_03235	0.86	-0.8
3,604,690	+				-0.7
3,604,698	-				-0.4
3,604,698	-				+0.4
3,604,748	-				-0.2
3,604,756	+				+0.8
3,604,774	-				+0.3
3,604,791	-				+0.1
3,604,896	+		MIT1002_03236	0.17	-1.8
3,604,912	-		MIT1002_03236	0.19	+0.8
3,604,983	-		MIT1002_03236	0.28	-0.1
3,605,025	-		MIT1002_03236	0.33	-0.7
3,605,029	+		MIT1002_03236	0.33	-0.0
3,605,039	+		MIT1002_03236	0.35	-0.3
3,605,086	-		MIT1002_03236	0.40	+1.2
3,605,193	-		MIT1002_03236	0.54	-0.4
3,605,394	+		MIT1002_03236	0.78	+1.6
3,605,517	+				+1.4
3,605,578	-				+0.4
3,605,588	+				+1.1
3,605,588	+				+0.4
3,605,596	-				-0.6
3,605,625	-				+0.4
3,605,679	-				-1.1
3,605,681	+				-0.8
3,605,681	+				+1.8
3,605,689	-				+1.4
3,605,697	+				-0.5
3,605,711	+				+0.8
3,605,733	-				+0.1
3,605,735	+				-1.2