Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03169

Experiment: monoculture; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 5
3,531,027	-		MIT1002_03167	0.79	-0.6
3,531,119	-		MIT1002_03167	0.86	-0.8
3,531,124	+		MIT1002_03167	0.87	-0.2
3,531,174	+				+0.4
3,531,174	+				-0.5
3,531,180	+				+0.3
3,531,180	+				-1.0
3,531,182	-				+0.6
3,531,188	-				+0.7
3,531,216	-				-0.1
3,531,230	+				-0.1
3,531,263	+				+1.1
3,531,263	+				+0.5
3,531,280	-				+1.9
3,531,282	+				-0.8
3,531,439	+				-1.1
3,531,455	-				+0.6
3,531,457	-				+3.4
3,531,550	+		MIT1002_03168	0.26	+0.7
3,531,550	+		MIT1002_03168	0.26	-0.9
3,531,551	-		MIT1002_03168	0.26	+0.6
3,531,558	-		MIT1002_03168	0.28	-0.3
3,531,558	-		MIT1002_03168	0.28	-0.6
3,531,580	+		MIT1002_03168	0.35	+1.1
3,531,671	+		MIT1002_03168	0.62	-0.7
3,531,779	-				-2.4
3,531,809	-				+0.3
3,532,018	+				+0.4
3,532,018	+				+0.3
3,532,073	+		MIT1002_03169	0.18	+0.2
3,532,149	+		MIT1002_03169	0.35	+8.3
3,532,183	+		MIT1002_03169	0.43	+1.0
3,532,183	+		MIT1002_03169	0.43	-0.0
3,532,191	-		MIT1002_03169	0.44	+0.4
3,532,191	-		MIT1002_03169	0.44	-0.6
3,532,326	-		MIT1002_03169	0.74	+0.7
3,532,345	+		MIT1002_03169	0.79	+2.4
3,532,352	+		MIT1002_03169	0.80	+0.7
3,532,401	+				-0.8
3,532,404	-				+0.1
3,532,443	-				+1.9
3,532,485	-				+0.6
3,532,496	-				+0.6
3,532,506	-				-0.4
3,532,514	+				+0.5
3,532,534	-				-0.8
3,532,570	+				-0.2
3,532,619	+				+1.4
3,532,651	+		MIT1002_03170	0.11	-0.3
3,532,651	+		MIT1002_03170	0.11	+2.2
3,532,651	+		MIT1002_03170	0.11	+0.7
3,532,688	+		MIT1002_03170	0.14	+0.8
3,532,695	+		MIT1002_03170	0.14	+0.7
3,532,735	-		MIT1002_03170	0.18	-0.5
3,532,775	-		MIT1002_03170	0.21	-1.1
3,532,821	+		MIT1002_03170	0.25	-0.3
3,532,823	+		MIT1002_03170	0.25	+0.5
3,532,829	-		MIT1002_03170	0.25	+1.0
3,532,829	-		MIT1002_03170	0.25	+0.1
3,532,829	-		MIT1002_03170	0.25	+0.6
3,532,842	+		MIT1002_03170	0.26	-0.2
3,532,852	-		MIT1002_03170	0.27	-0.8
3,532,852	-		MIT1002_03170	0.27	+1.4
3,532,859	+		MIT1002_03170	0.28	-0.6
3,532,859	+		MIT1002_03170	0.28	+0.2
3,532,867	-		MIT1002_03170	0.28	-0.1
3,532,867	-		MIT1002_03170	0.28	-0.5
3,532,867	-		MIT1002_03170	0.28	+0.4
3,532,867	-		MIT1002_03170	0.28	+0.9
3,532,885	-		MIT1002_03170	0.30	-0.8
3,532,937	+		MIT1002_03170	0.34	+0.5
3,532,942	+		MIT1002_03170	0.34	-0.6
3,532,942	+		MIT1002_03170	0.34	-0.1
3,532,950	+		MIT1002_03170	0.35	-0.3
3,532,988	+		MIT1002_03170	0.38	+0.9
3,533,029	+		MIT1002_03170	0.41	-0.8
3,533,051	-		MIT1002_03170	0.43	+1.6
3,533,180	+		MIT1002_03170	0.54	+0.7
3,533,182	-		MIT1002_03170	0.54	+0.9
3,533,233	+		MIT1002_03170	0.58	+0.5
3,533,233	+		MIT1002_03170	0.58	-0.1
3,533,233	+		MIT1002_03170	0.58	-1.7
3,533,233	-		MIT1002_03170	0.58	+1.2
3,533,241	-		MIT1002_03170	0.59	+0.4
3,533,287	-		MIT1002_03170	0.62	+0.7
3,533,302	+		MIT1002_03170	0.64	+0.2
3,533,303	-		MIT1002_03170	0.64	-0.1
3,533,339	-		MIT1002_03170	0.67	-1.9
3,533,416	+		MIT1002_03170	0.73	-0.8
3,533,416	+		MIT1002_03170	0.73	-0.5