Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03147

Experiment: monoculture; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 5
3,507,698	-		MIT1002_03145	0.69	-1.5
3,507,703	+		MIT1002_03145	0.69	+0.8
3,507,724	+		MIT1002_03145	0.72	-1.4
3,507,753	+		MIT1002_03145	0.75	-0.1
3,507,753	+		MIT1002_03145	0.75	-0.3
3,507,753	+		MIT1002_03145	0.75	-0.4
3,507,753	+		MIT1002_03145	0.75	+0.6
3,507,753	+		MIT1002_03145	0.75	-1.1
3,507,753	+		MIT1002_03145	0.75	-0.4
3,507,760	+		MIT1002_03145	0.76	+0.2
3,507,761	-		MIT1002_03145	0.76	-0.1
3,507,761	-		MIT1002_03145	0.76	-1.7
3,507,763	-		MIT1002_03145	0.76	-1.0
3,507,769	-		MIT1002_03145	0.77	+0.8
3,507,788	+		MIT1002_03145	0.79	+1.7
3,507,797	+		MIT1002_03145	0.80	-0.9
3,507,903	+				-0.9
3,507,908	+				-2.8
3,507,958	+				+0.1
3,507,966	-				+0.2
3,507,966	-				-3.1
3,508,070	-				-0.0
3,508,090	-				-0.7
3,508,156	+				+2.1
3,508,156	+				+2.4
3,508,164	-		MIT1002_03146	0.11	+0.8
3,508,164	-		MIT1002_03146	0.11	+0.3
3,508,164	-		MIT1002_03146	0.11	-0.3
3,508,188	+		MIT1002_03146	0.17	-0.9
3,508,196	-		MIT1002_03146	0.19	+0.2
3,508,222	+		MIT1002_03146	0.25	+1.1
3,508,232	-		MIT1002_03146	0.28	+0.8
3,508,479	+		MIT1002_03146	0.89	-0.4
3,508,543	+				-1.0
3,508,548	+				-0.6
3,508,548	+				+0.8
3,508,549	+				-0.6
3,508,556	-				+0.5
3,508,585	+				+0.6
3,508,602	+				-0.9
3,508,602	+				-0.2
3,508,612	-				+1.3
3,508,620	+				+0.2
3,508,719	+		MIT1002_03147	0.15	-1.9
3,508,863	-		MIT1002_03147	0.50	+2.2
3,508,903	-		MIT1002_03147	0.60	+1.3
3,509,019	-		MIT1002_03147	0.89	-1.0
3,509,204	-		MIT1002_03148	0.24	-0.2
3,509,228	+		MIT1002_03148	0.28	-0.8
3,509,228	+		MIT1002_03148	0.28	+1.1
3,509,250	-		MIT1002_03148	0.32	+0.7
3,509,271	+		MIT1002_03148	0.35	-4.1
3,509,391	+		MIT1002_03148	0.55	-0.9
3,509,409	-		MIT1002_03148	0.58	-2.3
3,509,455	+		MIT1002_03148	0.66	+0.8
3,509,467	+		MIT1002_03148	0.67	-0.8
3,509,491	+		MIT1002_03148	0.71	+0.2
3,509,586	+		MIT1002_03148	0.87	+0.6
3,509,621	+				-0.2
3,509,629	-				+0.3
3,509,656	+				-0.6
3,509,712	+				+4.1
3,509,733	+				+1.0
3,509,812	-				+1.0
3,509,812	-				+0.1
3,509,921	-		MIT1002_03149	0.17	-0.7
3,509,940	+		MIT1002_03149	0.18	-0.5
3,509,949	-		MIT1002_03149	0.19	-2.0
3,509,987	+		MIT1002_03149	0.22	-2.3
3,509,995	-		MIT1002_03149	0.22	-1.2
3,510,008	+		MIT1002_03149	0.23	+0.6
3,510,013	+		MIT1002_03149	0.23	+0.3
3,510,023	-		MIT1002_03149	0.24	-0.9