Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03074

Experiment: monoculture; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 5
3,426,064	+		MIT1002_03072	0.17	+2.2
3,426,072	-		MIT1002_03072	0.20	-0.6
3,426,072	-		MIT1002_03072	0.20	+0.8
3,426,112	+		MIT1002_03072	0.31	-0.8
3,426,167	+		MIT1002_03072	0.47	+0.5
3,426,193	+		MIT1002_03072	0.55	+1.9
3,426,239	-		MIT1002_03072	0.68	+0.2
3,426,249	+		MIT1002_03072	0.71	-1.3
3,426,267	+		MIT1002_03072	0.77	+0.3
3,426,292	+		MIT1002_03072	0.84	+0.7
3,426,300	-		MIT1002_03072	0.86	+0.9
3,426,366	-				+1.6
3,426,380	+				-0.5
3,426,380	+				-2.1
3,426,380	+				+1.3
3,426,388	-				-0.9
3,426,489	-		MIT1002_03073	0.21	+2.4
3,426,551	-		MIT1002_03073	0.30	-0.4
3,426,557	-		MIT1002_03073	0.31	-0.6
3,426,559	-		MIT1002_03073	0.31	+0.8
3,426,561	+		MIT1002_03073	0.31	+2.2
3,426,561	+		MIT1002_03073	0.31	+0.9
3,426,561	+		MIT1002_03073	0.31	+0.6
3,426,561	+		MIT1002_03073	0.31	-1.1
3,426,561	+		MIT1002_03073	0.31	+0.5
3,426,561	+		MIT1002_03073	0.31	-1.6
3,426,561	+		MIT1002_03073	0.31	-0.8
3,426,561	+		MIT1002_03073	0.31	-1.5
3,426,561	+		MIT1002_03073	0.31	-1.5
3,426,561	+		MIT1002_03073	0.31	+1.1
3,426,569	-		MIT1002_03073	0.32	+1.4
3,426,569	-		MIT1002_03073	0.32	+0.1
3,426,569	-		MIT1002_03073	0.32	-1.0
3,426,569	-		MIT1002_03073	0.32	+1.3
3,426,569	-		MIT1002_03073	0.32	+0.8
3,426,569	-		MIT1002_03073	0.32	+0.4
3,426,569	-		MIT1002_03073	0.32	+0.6
3,426,703	+		MIT1002_03073	0.51	+2.0
3,426,711	-		MIT1002_03073	0.52	+0.0
3,426,736	-		MIT1002_03073	0.55	+0.4
3,426,736	-		MIT1002_03073	0.55	-0.9
3,426,740	+		MIT1002_03073	0.56	-0.2
3,426,748	-		MIT1002_03073	0.57	-0.5
3,426,750	+		MIT1002_03073	0.57	+0.4
3,426,757	+		MIT1002_03073	0.58	-1.7
3,426,757	+		MIT1002_03073	0.58	+1.7
3,426,765	-		MIT1002_03073	0.59	+0.3
3,426,837	-		MIT1002_03073	0.69	+1.7
3,426,864	+		MIT1002_03073	0.73	-0.4
3,427,021	-				+1.2
3,427,130	+		MIT1002_03074	0.15	+0.4
3,427,130	+		MIT1002_03074	0.15	+1.3
3,427,154	+		MIT1002_03074	0.20	+0.3
3,427,155	-		MIT1002_03074	0.20	-1.2
3,427,198	-		MIT1002_03074	0.29	-0.2
3,427,313	+		MIT1002_03074	0.52	-0.7
3,427,313	+		MIT1002_03074	0.52	+0.8
3,427,321	-		MIT1002_03074	0.54	-0.6
3,427,347	-		MIT1002_03074	0.59	+1.0
3,427,446	+		MIT1002_03074	0.79	-1.5
3,427,521	+				-0.1
3,427,521	+				+0.6
3,427,521	+				+0.1
3,427,529	-				-0.1
3,427,529	-				-1.7
3,427,575	-				+0.6
3,427,585	-				+0.3
3,427,678	+				+0.3
3,427,678	+				-0.4
3,427,821	+				-1.3
3,427,942	+				-0.1
3,427,949	+				+0.1
3,427,949	+				-2.4
3,427,949	+				+1.6
3,427,950	-				-0.3
3,427,957	-				+0.2
3,427,957	-				-0.9
3,428,072	+				+3.1
3,428,078	-				-1.7
3,428,080	-				-0.4
3,428,090	-				-0.4
3,428,091	+				+0.0
3,428,145	-				-0.3
3,428,148	-				-2.0
3,428,242	-				+0.6
3,428,242	-				-0.5
3,428,242	-				-0.2
3,428,244	+				+0.5
3,428,252	-				-0.3
3,428,254	+				+1.9
3,428,254	+				-1.0
3,428,259	+				-2.3
3,428,259	+				+0.7
3,428,259	+				+0.2
3,428,262	-				+0.8
3,428,262	-				-0.9
3,428,264	+				+0.3
3,428,267	-				-0.4
3,428,267	-				+0.0
3,428,272	-				+0.5
3,428,272	-				-0.4
3,428,272	-				-0.1
3,428,282	+				+1.4
3,428,284	-				+0.1
3,428,309	-				+0.6
3,428,469	-		MIT1002_03075	0.21	-1.1
3,428,542	+		MIT1002_03075	0.27	+1.0