Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02736

Experiment: monoculture; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 5
3,036,993	-		MIT1002_02735	0.76	+0.4
3,036,997	+		MIT1002_02735	0.76	-0.2
3,037,000	-		MIT1002_02735	0.76	+0.9
3,037,016	-		MIT1002_02735	0.77	-0.6
3,037,076	+		MIT1002_02735	0.78	+0.8
3,037,084	-		MIT1002_02735	0.79	+0.8
3,037,084	-		MIT1002_02735	0.79	-1.5
3,037,084	-		MIT1002_02735	0.79	-1.0
3,037,136	+		MIT1002_02735	0.80	-1.9
3,037,144	-		MIT1002_02735	0.80	+1.4
3,037,162	+		MIT1002_02735	0.80	+1.4
3,037,183	-		MIT1002_02735	0.81	-0.1
3,037,229	-		MIT1002_02735	0.82	+1.3
3,037,289	-		MIT1002_02735	0.84	-1.3
3,037,299	-		MIT1002_02735	0.84	-0.5
3,037,341	+		MIT1002_02735	0.85	-1.2
3,037,341	+		MIT1002_02735	0.85	-0.5
3,037,341	+		MIT1002_02735	0.85	-1.3
3,037,428	-		MIT1002_02735	0.87	-0.1
3,037,504	-		MIT1002_02735	0.89	-1.9
3,037,516	+		MIT1002_02735	0.89	-1.1
3,037,524	-		MIT1002_02735	0.89	-0.3
3,037,549	+		MIT1002_02735	0.90	+0.0
3,037,552	-				-0.3
3,037,609	-				+0.0
3,037,672	+				-1.8
3,037,673	-				-0.0
3,037,673	-				+0.1
3,037,700	+				+1.9
3,037,723	-				+0.9
3,037,803	-				+0.7
3,037,845	-				+0.5
3,037,929	-				+0.5
3,037,929	-				-0.2
3,037,981	+				-0.7
3,038,061	-		MIT1002_02736	0.17	-0.2
3,038,122	+		MIT1002_02736	0.28	+1.4
3,038,187	-		MIT1002_02736	0.39	+0.1
3,038,189	-		MIT1002_02736	0.40	+0.8
3,038,206	+		MIT1002_02736	0.43	+0.4
3,038,244	+		MIT1002_02736	0.49	-1.2
3,038,281	-		MIT1002_02736	0.56	+0.6
3,038,290	-		MIT1002_02736	0.57	-0.6
3,038,310	+		MIT1002_02736	0.61	+0.2
3,038,323	-		MIT1002_02736	0.63	+1.2
3,038,333	-		MIT1002_02736	0.65	-2.5
3,038,517	-				-0.6
3,038,791	-		MIT1002_02737	0.31	+0.7
3,038,840	+		MIT1002_02737	0.37	+0.8
3,038,853	+		MIT1002_02737	0.38	+0.1
3,038,870	+		MIT1002_02737	0.40	+1.9
3,038,870	+		MIT1002_02737	0.40	-0.3
3,038,871	-		MIT1002_02737	0.40	+0.8
3,038,878	-		MIT1002_02737	0.41	-0.7
3,038,885	-		MIT1002_02737	0.42	+1.4
3,038,895	+		MIT1002_02737	0.43	-0.9
3,038,895	+		MIT1002_02737	0.43	-1.9
3,038,915	+		MIT1002_02737	0.45	-0.6
3,038,915	+		MIT1002_02737	0.45	+2.2
3,038,918	-		MIT1002_02737	0.46	-1.9
3,038,963	+		MIT1002_02737	0.51	+0.9
3,038,973	-		MIT1002_02737	0.52	-0.0
3,039,010	+		MIT1002_02737	0.56	-0.5
3,039,021	-		MIT1002_02737	0.58	+1.4
3,039,035	+		MIT1002_02737	0.59	-2.7
3,039,035	+		MIT1002_02737	0.59	-0.5
3,039,054	+		MIT1002_02737	0.62	+0.2
3,039,062	-		MIT1002_02737	0.62	+0.5
3,039,159	+		MIT1002_02737	0.74	+0.4
3,039,164	+		MIT1002_02737	0.74	+0.6
3,039,186	+		MIT1002_02737	0.77	-0.6
3,039,252	-		MIT1002_02737	0.85	-0.5
3,039,266	+		MIT1002_02737	0.86	-1.1
3,039,317	+				+0.1
3,039,352	-				+0.4
3,039,359	-				-2.2
3,039,421	-				+1.0
3,039,463	-		MIT1002_02738	0.13	-1.1
3,039,529	+		MIT1002_02738	0.24	-1.2