Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02538

Experiment: monoculture; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 5
2,832,331	+				-0.6
2,832,339	+				-0.7
2,832,339	-				-2.3
2,832,341	+				+0.7
2,832,349	-				+0.3
2,832,354	-				+0.2
2,832,475	-				+0.9
2,832,695	-		MIT1002_02538	0.23	-0.1
2,833,135	-		MIT1002_02538	0.59	+0.5
2,833,209	+		MIT1002_02538	0.65	-0.7
2,833,233	+		MIT1002_02538	0.67	-0.4
2,833,688	+				-0.1
2,833,696	-				+0.5
2,833,698	+				-1.0
2,833,759	-				-2.4
2,833,831	+				+0.5
2,833,865	+				-0.2
2,833,867	+				+1.0
2,833,867	+				-0.8
2,833,875	-				+1.1
2,833,875	-				+1.5
2,833,875	-				-1.7
2,833,875	-				+0.1
2,833,875	-				+0.7
2,833,875	-				-2.4
2,833,912	+				-0.7
2,833,985	+				-1.9
2,833,993	-				-0.2
2,834,019	+				-0.6
2,834,064	+		MIT1002_02539	0.13	-0.4
2,834,090	+		MIT1002_02539	0.15	+1.7
2,834,090	+		MIT1002_02539	0.15	-0.5
2,834,090	+		MIT1002_02539	0.15	+1.3
2,834,098	-		MIT1002_02539	0.16	+0.2
2,834,217	+		MIT1002_02539	0.27	-0.1
2,834,319	-		MIT1002_02539	0.37	-0.9
2,834,329	+		MIT1002_02539	0.38	+1.5
2,834,410	+		MIT1002_02539	0.45	-0.5
2,834,476	+		MIT1002_02539	0.52	-0.8
2,834,529	+		MIT1002_02539	0.57	+0.2
2,834,545	+		MIT1002_02539	0.58	-0.1
2,834,593	-		MIT1002_02539	0.63	-0.3
2,834,601	-		MIT1002_02539	0.64	+0.7
2,834,601	-		MIT1002_02539	0.64	-0.8