Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02525

Experiment: monoculture; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 5
2,814,428	+		MIT1002_02524	0.37	-3.3
2,814,428	+		MIT1002_02524	0.37	-1.2
2,814,523	-		MIT1002_02524	0.43	-4.3
2,814,523	-		MIT1002_02524	0.43	+0.1
2,814,553	+		MIT1002_02524	0.45	-4.5
2,814,561	-		MIT1002_02524	0.45	-3.9
2,814,598	+		MIT1002_02524	0.48	-1.8
2,814,606	-		MIT1002_02524	0.48	+0.7
2,814,606	-		MIT1002_02524	0.48	-4.0
2,814,681	-		MIT1002_02524	0.53	-0.7
2,814,785	-		MIT1002_02524	0.60	-5.2
2,814,804	+		MIT1002_02524	0.61	-4.0
2,814,804	+		MIT1002_02524	0.61	-0.1
2,814,804	+		MIT1002_02524	0.61	+0.3
2,814,812	-		MIT1002_02524	0.62	-4.2
2,814,818	-		MIT1002_02524	0.62	-0.8
2,814,856	+		MIT1002_02524	0.65	-4.7
2,814,856	+		MIT1002_02524	0.65	-2.1
2,814,955	+		MIT1002_02524	0.71	-5.4
2,815,039	+		MIT1002_02524	0.77	-0.6
2,815,130	+		MIT1002_02524	0.83	-4.6
2,815,141	+		MIT1002_02524	0.83	-3.4
2,815,141	+		MIT1002_02524	0.83	-3.4
2,815,144	+		MIT1002_02524	0.84	-1.7
2,815,165	+		MIT1002_02524	0.85	-2.1
2,815,175	-		MIT1002_02524	0.86	-2.6
2,815,183	+		MIT1002_02524	0.86	-5.3
2,815,297	-				-0.8
2,815,324	-				-2.6
2,815,327	+				-2.7
2,815,327	+				-2.4
2,815,328	+				-5.1
2,815,328	+				-5.0
2,815,335	-				-6.4
2,815,335	-				-2.2
2,815,343	+				-0.8
2,815,345	-				-2.1
2,815,391	-				+0.3
2,815,399	-				-6.0
2,815,445	-				-2.0
2,815,509	-		MIT1002_02525	0.21	-3.4
2,815,568	-		MIT1002_02525	0.33	-3.0
2,815,601	+		MIT1002_02525	0.39	-2.0
2,815,610	+		MIT1002_02525	0.41	-1.7
2,815,618	-		MIT1002_02525	0.43	+0.0
2,815,618	-		MIT1002_02525	0.43	-0.9
2,815,620	+		MIT1002_02525	0.43	-3.4
2,815,862	+				-3.4
2,815,881	+				-4.0
2,815,886	+				-4.1
2,815,889	-				-5.2
2,815,928	-				-1.8
2,816,016	-				-1.4
2,816,041	-				+0.6
2,816,081	-				+1.7
2,816,109	+				-0.7
2,816,176	+		MIT1002_02526	0.19	+0.0
2,816,176	+		MIT1002_02526	0.19	-1.5
2,816,176	+		MIT1002_02526	0.19	+0.1
2,816,213	+		MIT1002_02526	0.25	-1.0
2,816,244	+		MIT1002_02526	0.30	-0.2
2,816,251	+		MIT1002_02526	0.31	+1.5
2,816,293	-		MIT1002_02526	0.38	-0.8
2,816,303	-		MIT1002_02526	0.40	-0.2
2,816,401	-		MIT1002_02526	0.55	-0.5
2,816,411	+		MIT1002_02526	0.57	-0.9
2,816,643	+				+0.7