Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02129

Experiment: monoculture; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 5
2,389,811	+		MIT1002_02127	0.78	-1.6
2,389,836	+		MIT1002_02127	0.84	-0.8
2,389,845	+		MIT1002_02127	0.85	+0.8
2,389,845	+		MIT1002_02127	0.85	-2.1
2,389,845	+		MIT1002_02127	0.85	-0.7
2,389,845	+		MIT1002_02127	0.85	-1.0
2,389,845	+		MIT1002_02127	0.85	-2.6
2,389,845	+		MIT1002_02127	0.85	-0.6
2,389,845	+		MIT1002_02127	0.85	-1.5
2,389,845	+		MIT1002_02127	0.85	-0.7
2,389,853	-		MIT1002_02127	0.87	-0.5
2,389,853	-		MIT1002_02127	0.87	-0.4
2,389,853	-		MIT1002_02127	0.87	-2.4
2,389,853	-		MIT1002_02127	0.87	-2.1
2,389,853	-		MIT1002_02127	0.87	-1.8
2,389,853	-		MIT1002_02127	0.87	+1.2
2,389,857	+		MIT1002_02127	0.88	+0.4
2,389,858	+		MIT1002_02127	0.88	-1.6
2,390,016	+				+1.1
2,390,043	-				-0.2
2,390,106	+		MIT1002_02128	0.14	-1.1
2,390,125	-		MIT1002_02128	0.18	+1.2
2,390,135	+		MIT1002_02128	0.20	-0.4
2,390,205	+		MIT1002_02128	0.35	+0.6
2,390,364	+		MIT1002_02128	0.68	-0.2
2,390,427	+		MIT1002_02128	0.81	-1.6
2,390,434	-		MIT1002_02128	0.83	-2.3
2,390,550	+				+0.2
2,390,558	-				-2.5
2,390,558	-				-0.9
2,390,594	+				-1.4
2,390,931	+		MIT1002_02129	0.13	-0.8
2,391,098	-		MIT1002_02129	0.25	-0.9
2,391,124	+		MIT1002_02129	0.26	+0.6
2,391,159	+		MIT1002_02129	0.29	-1.2
2,391,415	+		MIT1002_02129	0.47	+0.2
2,391,480	+		MIT1002_02129	0.51	-0.7
2,391,488	-		MIT1002_02129	0.52	-0.7
2,391,536	-		MIT1002_02129	0.55	-1.3
2,391,549	-		MIT1002_02129	0.56	-1.2
2,391,551	+		MIT1002_02129	0.56	+0.2
2,391,607	+		MIT1002_02129	0.60	-0.0
2,391,628	-		MIT1002_02129	0.62	+1.2
2,391,764	+		MIT1002_02129	0.71	-1.6
2,391,789	+		MIT1002_02129	0.73	-0.5
2,391,794	-		MIT1002_02129	0.73	-0.4
2,391,827	-		MIT1002_02129	0.75	+0.4
2,391,876	+		MIT1002_02129	0.79	+0.6
2,391,879	-		MIT1002_02129	0.79	+1.2
2,391,923	+		MIT1002_02129	0.82	-0.6
2,391,931	-		MIT1002_02129	0.83	-0.7
2,391,975	+		MIT1002_02129	0.86	+0.8
2,392,046	-				-0.3
2,392,113	-				+0.6
2,392,143	-				-0.2
2,392,251	-				-0.4
2,392,348	-		MIT1002_02130	0.25	-0.5
2,392,452	+		MIT1002_02130	0.42	-0.9
2,392,594	-		MIT1002_02130	0.66	-0.7
2,392,701	-		MIT1002_02130	0.83	-0.0
2,392,814	+				-0.5
2,392,977	-				+0.8
2,393,016	+				+1.2
2,393,025	-				+1.2
2,393,090	-		MIT1002_02132	0.12	+0.4