Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01858

Experiment: monoculture; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 5
2,068,752	-				-0.0
2,068,778	-				+0.2
2,068,839	-				+0.9
2,068,854	+				-0.3
2,068,924	+				-0.4
2,068,971	+		MIT1002_01858	0.17	-1.0
2,069,004	+		MIT1002_01858	0.22	-0.5
2,069,010	-		MIT1002_01858	0.23	-0.7
2,069,035	+		MIT1002_01858	0.27	+0.0
2,069,053	+		MIT1002_01858	0.30	+0.0
2,069,061	-		MIT1002_01858	0.31	+1.0
2,069,068	+		MIT1002_01858	0.32	-1.1
2,069,111	-		MIT1002_01858	0.39	-1.3
2,069,125	+		MIT1002_01858	0.42	+2.6
2,069,125	+		MIT1002_01858	0.42	+1.1
2,069,133	-		MIT1002_01858	0.43	-1.6
2,069,133	-		MIT1002_01858	0.43	-1.1
2,069,133	-		MIT1002_01858	0.43	+0.6
2,069,133	-		MIT1002_01858	0.43	-1.8
2,069,133	-		MIT1002_01858	0.43	-0.2
2,069,140	-		MIT1002_01858	0.44	-0.6
2,069,161	+		MIT1002_01858	0.47	+0.5
2,069,161	+		MIT1002_01858	0.47	+0.0
2,069,161	+		MIT1002_01858	0.47	+1.2
2,069,169	-		MIT1002_01858	0.49	-0.8
2,069,241	-		MIT1002_01858	0.60	+0.0
2,069,254	-		MIT1002_01858	0.62	-0.5
2,069,256	-		MIT1002_01858	0.63	-0.6
2,069,261	-		MIT1002_01858	0.64	+0.2
2,069,319	+		MIT1002_01858	0.73	-1.0
2,069,418	+		MIT1002_01858	0.89	+1.4
2,069,434	+				+1.2
2,069,464	-				-0.0
2,069,496	-				-1.4
2,069,535	-				+0.8
2,069,602	+				+1.0
2,069,603	+				-0.2
2,069,644	-				+0.9
2,069,644	-				+0.6
2,069,664	+				-0.2
2,069,664	+				-0.5
2,069,664	+				-0.1
2,069,664	+				-0.1
2,069,672	-				+1.6
2,069,672	-				-0.2
2,069,672	-				-3.0
2,069,672	-				-0.9
2,069,683	+				-0.6
2,069,711	+				+1.2
2,069,824	+				-1.3
2,069,825	-				+2.1
2,069,832	-				+1.0
2,069,910	+				-0.1
2,069,918	-				-0.4
2,069,920	+				-0.5
2,069,928	-				+0.5
2,069,989	+				+2.2
2,069,998	+				-1.5
2,070,006	-				-1.7
2,070,176	+				-1.1
2,070,226	-				-0.8
2,070,304	+		MIT1002_01859	0.13	+0.5
2,070,361	-		MIT1002_01859	0.15	-1.4
2,070,361	-		MIT1002_01859	0.15	-0.2
2,070,378	+		MIT1002_01859	0.16	+0.1
2,070,378	+		MIT1002_01859	0.16	+1.7
2,070,378	+		MIT1002_01859	0.16	-1.2
2,070,378	+		MIT1002_01859	0.16	+0.4
2,070,386	-		MIT1002_01859	0.16	-0.1
2,070,386	-		MIT1002_01859	0.16	+1.0
2,070,386	-		MIT1002_01859	0.16	+0.9