Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01692

Experiment: monoculture; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 5
1,879,326	+		MIT1002_01690	0.76	+2.2
1,879,328	-		MIT1002_01690	0.77	+0.9
1,879,358	+		MIT1002_01690	0.83	-1.3
1,879,363	+		MIT1002_01690	0.84	-0.4
1,879,372	-		MIT1002_01690	0.86	+0.1
1,879,379	+		MIT1002_01690	0.88	-1.3
1,879,379	+		MIT1002_01690	0.88	-0.4
1,879,379	+		MIT1002_01690	0.88	+0.0
1,879,379	+		MIT1002_01690	0.88	-0.1
1,879,379	+		MIT1002_01690	0.88	+1.2
1,879,387	-		MIT1002_01690	0.89	-1.8
1,879,498	+				+0.3
1,880,253	+				+1.4
1,880,257	-				-0.8
1,880,418	-				+1.3
1,880,468	+				-0.4
1,880,512	+		MIT1002_01692	0.13	+0.1
1,880,609	+		MIT1002_01692	0.19	-0.6
1,880,609	+		MIT1002_01692	0.19	+1.0
1,880,609	+		MIT1002_01692	0.19	-1.0
1,880,609	+		MIT1002_01692	0.19	-0.1
1,880,609	+		MIT1002_01692	0.19	+0.1
1,880,617	-		MIT1002_01692	0.20	-2.3
1,880,617	-		MIT1002_01692	0.20	-0.4
1,880,631	-		MIT1002_01692	0.21	+0.1
1,880,683	+		MIT1002_01692	0.24	+0.0
1,880,716	-		MIT1002_01692	0.26	+0.6
1,880,843	+		MIT1002_01692	0.35	-1.9
1,880,937	-		MIT1002_01692	0.41	-0.1
1,880,963	+		MIT1002_01692	0.43	+0.7
1,880,995	+		MIT1002_01692	0.45	-1.4
1,880,995	+		MIT1002_01692	0.45	-0.4
1,881,093	+		MIT1002_01692	0.52	-0.3
1,881,101	-		MIT1002_01692	0.52	-0.9
1,881,260	-		MIT1002_01692	0.63	-2.3
1,881,301	+		MIT1002_01692	0.66	+2.8
1,881,318	-		MIT1002_01692	0.67	-0.1
1,881,331	-		MIT1002_01692	0.68	-0.7
1,881,352	+		MIT1002_01692	0.69	+0.3
1,881,359	+		MIT1002_01692	0.70	-1.2
1,881,359	+		MIT1002_01692	0.70	+0.2
1,881,359	+		MIT1002_01692	0.70	-0.0
1,881,374	-		MIT1002_01692	0.71	+1.7
1,881,462	+		MIT1002_01692	0.76	-0.1
1,881,489	+		MIT1002_01692	0.78	-0.9
1,881,504	-		MIT1002_01692	0.79	-1.0
1,881,508	+		MIT1002_01692	0.80	+0.8
1,881,536	-		MIT1002_01692	0.81	+0.0
1,881,579	+		MIT1002_01692	0.84	-0.5
1,881,594	-		MIT1002_01692	0.85	+0.5
1,881,610	+		MIT1002_01692	0.86	-0.5
1,881,610	+		MIT1002_01692	0.86	+0.8
1,881,618	-		MIT1002_01692	0.87	-0.4
1,881,618	-		MIT1002_01692	0.87	+1.0
1,881,623	+		MIT1002_01692	0.87	-1.3
1,881,623	+		MIT1002_01692	0.87	-0.9
1,881,683	-				+0.9
1,881,689	+				-0.3
1,881,758	-				-0.0
1,881,835	-				-1.7
1,881,847	+				+0.7
1,882,214	+				+1.2
1,882,224	+				-1.5
1,882,375	-		MIT1002_01696	0.32	-0.3
1,882,487	+				+0.1
1,882,617	-				-0.7
1,882,623	+				-0.5