Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01588

Experiment: monoculture; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 5
1,748,896	+		MIT1002_01587	0.71	+0.3
1,748,904	-		MIT1002_01587	0.71	+0.2
1,748,910	+		MIT1002_01587	0.71	+1.1
1,749,038	-		MIT1002_01587	0.77	+0.6
1,749,046	-		MIT1002_01587	0.77	+1.2
1,749,046	-		MIT1002_01587	0.77	-0.8
1,749,065	+		MIT1002_01587	0.78	-1.9
1,749,084	-		MIT1002_01587	0.79	-0.5
1,749,136	+		MIT1002_01587	0.81	+0.4
1,749,136	+		MIT1002_01587	0.81	-0.7
1,749,195	+		MIT1002_01587	0.83	+1.5
1,749,202	-		MIT1002_01587	0.83	+0.1
1,749,220	-		MIT1002_01587	0.84	+3.1
1,749,231	-		MIT1002_01587	0.85	-0.8
1,749,231	-		MIT1002_01587	0.85	-0.6
1,749,233	-		MIT1002_01587	0.85	+0.2
1,749,254	+		MIT1002_01587	0.86	-1.9
1,749,267	+		MIT1002_01587	0.86	-1.3
1,749,275	-		MIT1002_01587	0.86	+0.6
1,749,275	-		MIT1002_01587	0.86	+0.4
1,749,300	+		MIT1002_01587	0.87	-1.8
1,749,429	-				-0.1
1,749,591	+				-0.4
1,749,600	+				+0.9
1,749,863	+				+0.2
1,749,886	-				+2.2
1,749,886	-				+0.6
1,749,886	-				-0.3
1,749,939	+				-0.8
1,749,986	+				-3.1
1,749,989	-				-0.5
1,750,034	+		MIT1002_01588	0.12	-0.5
1,750,034	+		MIT1002_01588	0.12	+1.3
1,750,037	-		MIT1002_01588	0.12	+0.3
1,750,039	+		MIT1002_01588	0.12	-0.6
1,750,042	-		MIT1002_01588	0.12	+1.2
1,750,042	-		MIT1002_01588	0.12	+1.6
1,750,042	-		MIT1002_01588	0.12	-0.7
1,750,042	-		MIT1002_01588	0.12	-0.1
1,750,047	-		MIT1002_01588	0.13	-1.2
1,750,053	-		MIT1002_01588	0.13	+0.8
1,750,058	-		MIT1002_01588	0.13	+0.6
1,750,084	-		MIT1002_01588	0.15	+0.1
1,750,291	-		MIT1002_01588	0.28	+1.3
1,750,299	-		MIT1002_01588	0.29	-0.2
1,750,309	-		MIT1002_01588	0.29	+1.3
1,750,330	+		MIT1002_01588	0.31	+0.2
1,750,348	-		MIT1002_01588	0.32	+0.7
1,750,353	-		MIT1002_01588	0.32	+1.0
1,750,361	+		MIT1002_01588	0.33	-0.9
1,750,376	+		MIT1002_01588	0.33	-0.2
1,750,475	-		MIT1002_01588	0.40	-0.5
1,750,500	+		MIT1002_01588	0.41	-0.6
1,750,500	+		MIT1002_01588	0.41	-1.5
1,750,508	-		MIT1002_01588	0.42	+0.4
1,750,708	-		MIT1002_01588	0.54	+0.8
1,750,867	+		MIT1002_01588	0.65	+0.4
1,750,875	-		MIT1002_01588	0.65	+1.6
1,750,963	-		MIT1002_01588	0.71	-0.8
1,750,968	-		MIT1002_01588	0.71	-1.8
1,750,986	+		MIT1002_01588	0.72	+2.2
1,750,988	+		MIT1002_01588	0.72	+0.0
1,751,187	+		MIT1002_01588	0.85	-1.3
1,751,287	+				-1.9
1,751,323	+				-1.9
1,751,413	+				+0.5
1,751,413	+				+2.0
1,751,600	-		MIT1002_01589	0.50	-1.7
1,751,638	-		MIT1002_01589	0.61	-0.5
1,751,638	-		MIT1002_01589	0.61	+0.0
1,751,642	+		MIT1002_01589	0.63	-1.1
1,751,650	-		MIT1002_01589	0.65	-2.6
1,751,757	+				-1.9
1,751,803	-				+0.1
1,751,884	-				-1.3
1,752,000	-				-0.9
1,752,122	+		MIT1002_01590	0.37	-0.2
1,752,122	+		MIT1002_01590	0.37	+1.2
1,752,122	+		MIT1002_01590	0.37	+0.6
1,752,122	+		MIT1002_01590	0.37	+0.8
1,752,122	+		MIT1002_01590	0.37	-0.5
1,752,122	+		MIT1002_01590	0.37	+2.7
1,752,130	-		MIT1002_01590	0.39	+0.4
1,752,130	-		MIT1002_01590	0.39	+0.6
1,752,130	-		MIT1002_01590	0.39	-0.5
1,752,130	-		MIT1002_01590	0.39	+1.2
1,752,130	-		MIT1002_01590	0.39	-0.4
1,752,130	-		MIT1002_01590	0.39	-1.4
1,752,130	-		MIT1002_01590	0.39	-0.6
1,752,130	-		MIT1002_01590	0.39	+0.1
1,752,148	+		MIT1002_01590	0.44	+0.2
1,752,247	-		MIT1002_01590	0.71	+0.1
1,752,329	+				+1.1
1,752,390	+				+0.6
1,752,396	-				+0.3