Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01576

Experiment: monoculture; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 5
1,733,994	-		MIT1002_01575	0.59	-0.3
1,734,005	+		MIT1002_01575	0.60	-0.9
1,734,038	-		MIT1002_01575	0.62	-0.0
1,734,061	-		MIT1002_01575	0.64	-1.3
1,734,082	-		MIT1002_01575	0.65	-0.2
1,734,136	-		MIT1002_01575	0.69	-0.3
1,734,141	-		MIT1002_01575	0.70	+1.0
1,734,276	+		MIT1002_01575	0.79	+0.4
1,734,351	+		MIT1002_01575	0.84	-0.1
1,734,351	+		MIT1002_01575	0.84	-1.5
1,734,356	+		MIT1002_01575	0.84	-0.4
1,734,379	-		MIT1002_01575	0.86	-1.3
1,734,430	+		MIT1002_01575	0.90	+0.0
1,734,447	+				-2.4
1,734,511	+				+0.2
1,734,517	+				+0.9
1,734,517	+				-0.4
1,734,526	-				+1.2
1,734,613	-				-0.9
1,734,809	+				-0.2
1,734,844	+				-0.4
1,734,844	+				+0.2
1,734,844	+				+2.6
1,734,852	-				-0.0
1,734,852	-				-0.8
1,734,866	-				-1.5
1,734,882	+				-0.7
1,734,933	-				-1.2
1,734,942	-				+0.1
1,735,019	-				+1.1
1,735,088	+		MIT1002_01576	0.16	-1.8
1,735,123	-		MIT1002_01576	0.21	-0.5
1,735,131	+		MIT1002_01576	0.22	+0.2
1,735,167	+		MIT1002_01576	0.28	-1.5
1,735,167	+		MIT1002_01576	0.28	-2.7
1,735,202	-		MIT1002_01576	0.33	+0.6
1,735,372	+		MIT1002_01576	0.60	-1.3
1,735,374	-		MIT1002_01576	0.60	-0.6
1,735,402	-		MIT1002_01576	0.64	-1.9
1,735,427	-		MIT1002_01576	0.68	-1.8
1,735,481	+		MIT1002_01576	0.76	-0.6
1,735,488	+		MIT1002_01576	0.78	+0.8
1,735,488	+		MIT1002_01576	0.78	-0.7
1,735,501	-		MIT1002_01576	0.80	-1.6
1,735,518	-		MIT1002_01576	0.82	-0.4
1,735,686	-				-1.8
1,735,829	-		MIT1002_01577	0.21	-1.8
1,735,845	-		MIT1002_01577	0.23	-0.8
1,735,849	-		MIT1002_01577	0.23	-0.4
1,735,879	+		MIT1002_01577	0.26	-1.6
1,735,879	+		MIT1002_01577	0.26	+0.4
1,735,947	-		MIT1002_01577	0.34	-1.2
1,735,947	-		MIT1002_01577	0.34	-0.1
1,735,960	+		MIT1002_01577	0.35	-1.2
1,736,048	+		MIT1002_01577	0.45	+0.3
1,736,056	-		MIT1002_01577	0.45	-0.4
1,736,125	-		MIT1002_01577	0.53	-0.2
1,736,270	-		MIT1002_01577	0.68	+0.4
1,736,294	+		MIT1002_01577	0.71	-1.3
1,736,294	+		MIT1002_01577	0.71	-1.4
1,736,294	+		MIT1002_01577	0.71	-0.9
1,736,294	+		MIT1002_01577	0.71	-1.5
1,736,300	+		MIT1002_01577	0.72	-2.4
1,736,300	+		MIT1002_01577	0.72	+0.9
1,736,302	-		MIT1002_01577	0.72	-1.4
1,736,302	-		MIT1002_01577	0.72	-0.7
1,736,302	-		MIT1002_01577	0.72	-0.8
1,736,308	-		MIT1002_01577	0.72	+1.0
1,736,460	+		MIT1002_01577	0.89	-1.3
1,736,525	-				+0.5
1,736,557	+				-0.5
1,736,595	+				-0.5