Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01508

Experiment: monoculture; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 5
1,658,562	-		MIT1002_01507	0.14	-1.1
1,658,562	-		MIT1002_01507	0.14	-1.4
1,658,639	+		MIT1002_01507	0.21	-0.6
1,658,639	-		MIT1002_01507	0.21	-1.8
1,658,639	-		MIT1002_01507	0.21	-0.2
1,658,719	-		MIT1002_01507	0.29	+0.1
1,658,849	+		MIT1002_01507	0.42	-0.3
1,658,855	+		MIT1002_01507	0.43	-1.9
1,658,898	-		MIT1002_01507	0.47	+0.3
1,658,944	-		MIT1002_01507	0.52	+2.2
1,658,944	-		MIT1002_01507	0.52	+0.6
1,658,969	+		MIT1002_01507	0.54	-0.6
1,659,017	-		MIT1002_01507	0.59	+0.6
1,659,017	-		MIT1002_01507	0.59	-0.0
1,659,049	-		MIT1002_01507	0.62	-0.1
1,659,085	+		MIT1002_01507	0.66	+0.9
1,659,113	+		MIT1002_01507	0.69	-0.6
1,659,113	+		MIT1002_01507	0.69	-0.1
1,659,121	-		MIT1002_01507	0.70	+1.8
1,659,121	-		MIT1002_01507	0.70	+0.4
1,659,193	-		MIT1002_01507	0.77	-0.2
1,659,199	-		MIT1002_01507	0.77	+1.1
1,659,208	-		MIT1002_01507	0.78	-0.9
1,659,231	+		MIT1002_01507	0.81	+0.7
1,659,258	-		MIT1002_01507	0.83	+0.5
1,659,304	+		MIT1002_01507	0.88	-0.4
1,659,355	+				-2.7
1,659,457	+				+0.5
1,659,465	-				-1.2
1,659,465	-				-1.7
1,659,557	+				-1.2
1,659,594	+				-1.6
1,659,597	-				-0.2
1,659,620	+		MIT1002_01508	0.14	-1.0
1,659,630	+		MIT1002_01508	0.17	-1.2
1,659,630	+		MIT1002_01508	0.17	-2.2
1,659,630	+		MIT1002_01508	0.17	-3.3
1,659,638	-		MIT1002_01508	0.18	-1.2
1,659,650	+		MIT1002_01508	0.21	-2.6
1,659,662	+		MIT1002_01508	0.23	+0.2
1,659,662	+		MIT1002_01508	0.23	-1.6
1,659,670	-		MIT1002_01508	0.25	-0.6
1,659,683	-		MIT1002_01508	0.28	+0.6
1,659,697	+		MIT1002_01508	0.30	-4.1
1,659,710	-		MIT1002_01508	0.33	+0.6
1,659,789	+		MIT1002_01508	0.49	-2.4
1,659,817	+		MIT1002_01508	0.55	-0.0
1,659,817	+		MIT1002_01508	0.55	-3.4
1,659,875	-		MIT1002_01508	0.67	-1.7
1,659,886	+		MIT1002_01508	0.70	-0.9
1,659,894	-		MIT1002_01508	0.71	-1.9
1,659,894	-		MIT1002_01508	0.71	-4.3
1,659,894	-		MIT1002_01508	0.71	-2.3
1,659,971	-		MIT1002_01508	0.87	-1.1
1,659,971	-		MIT1002_01508	0.87	-1.8
1,659,980	+		MIT1002_01508	0.89	-2.6
1,659,988	-				-1.6
1,659,988	-				-2.1
1,660,005	+				-1.8
1,660,041	+				-2.1
1,660,062	+				-0.8
1,660,075	+				+0.6
1,660,145	+				-1.0
1,660,151	+				-0.3
1,660,151	+				+1.2
1,660,293	+				-1.2