Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01195

Experiment: monoculture; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 5
1,309,590	-				+0.4
1,309,605	+				+0.1
1,309,661	-				+0.6
1,309,665	-				-0.4
1,309,692	+				-1.0
1,309,701	-				+0.5
1,309,701	-				-2.4
1,309,728	-				+1.4
1,309,825	+		MIT1002_01194	0.12	+0.1
1,309,850	+		MIT1002_01194	0.17	+0.4
1,309,857	+		MIT1002_01194	0.18	+0.2
1,309,858	-		MIT1002_01194	0.18	+0.6
1,309,858	-		MIT1002_01194	0.18	-0.8
1,309,858	-		MIT1002_01194	0.18	-0.4
1,309,858	-		MIT1002_01194	0.18	-0.9
1,309,873	-		MIT1002_01194	0.21	+0.1
1,309,937	+		MIT1002_01194	0.32	+0.4
1,309,947	-		MIT1002_01194	0.34	-1.0
1,310,004	-		MIT1002_01194	0.44	-0.3
1,310,012	+		MIT1002_01194	0.45	+0.3
1,310,012	+		MIT1002_01194	0.45	+0.6
1,310,012	+		MIT1002_01194	0.45	-0.8
1,310,012	+		MIT1002_01194	0.45	-0.2
1,310,012	+		MIT1002_01194	0.45	+0.3
1,310,020	-		MIT1002_01194	0.47	-0.1
1,310,020	-		MIT1002_01194	0.47	-0.6
1,310,020	-		MIT1002_01194	0.47	+11.3
1,310,020	-		MIT1002_01194	0.47	-0.6
1,310,162	-		MIT1002_01194	0.72	-0.7
1,310,183	+		MIT1002_01194	0.75	-1.4
1,310,191	-		MIT1002_01194	0.77	+0.2
1,310,191	-		MIT1002_01194	0.77	-1.3
1,310,217	+		MIT1002_01194	0.81	+0.3
1,310,269	-				+1.4
1,310,269	-				-1.5
1,310,386	+				+1.2
1,310,386	+				-0.8
1,310,394	-				-1.5
1,310,394	-				-1.4
1,310,395	+				+0.5
1,310,401	+				+0.4
1,310,446	-				+0.1
1,310,477	+				+0.4
1,310,575	+				-1.2
1,310,596	+				-0.4
1,310,630	+				+0.8
1,310,666	-				+0.6
1,310,801	-		MIT1002_01195	0.13	+0.4
1,310,801	-		MIT1002_01195	0.13	-0.7
1,310,838	-		MIT1002_01195	0.15	+0.1
1,310,968	-		MIT1002_01195	0.22	+0.5
1,310,978	+		MIT1002_01195	0.22	-1.1
1,311,044	+		MIT1002_01195	0.26	-1.0
1,311,117	+		MIT1002_01195	0.29	+1.4
1,311,125	-		MIT1002_01195	0.30	+1.3
1,311,189	-		MIT1002_01195	0.33	-1.8
1,311,189	-		MIT1002_01195	0.33	-0.2
1,311,274	+		MIT1002_01195	0.37	+4.5
1,311,275	+		MIT1002_01195	0.37	+0.2
1,311,283	-		MIT1002_01195	0.38	+0.8
1,311,317	+		MIT1002_01195	0.40	-0.4
1,311,325	-		MIT1002_01195	0.40	-1.4
1,311,325	-		MIT1002_01195	0.40	-0.4
1,311,353	+		MIT1002_01195	0.41	-0.4
1,311,416	-		MIT1002_01195	0.45	+0.3
1,311,476	+		MIT1002_01195	0.48	+0.3
1,311,498	-		MIT1002_01195	0.49	+0.6
1,311,505	+		MIT1002_01195	0.49	+1.8
1,311,505	+		MIT1002_01195	0.49	+0.9
1,311,559	+		MIT1002_01195	0.52	-0.1
1,311,598	+		MIT1002_01195	0.54	-0.1
1,311,604	-		MIT1002_01195	0.54	+0.9
1,311,708	+		MIT1002_01195	0.60	-1.7
1,311,716	+		MIT1002_01195	0.60	+0.1
1,311,935	+		MIT1002_01195	0.71	+0.0
1,311,949	+		MIT1002_01195	0.72	+0.2
1,311,981	+		MIT1002_01195	0.73	+1.1
1,311,982	-		MIT1002_01195	0.74	-1.1
1,311,998	-		MIT1002_01195	0.74	-0.9
1,312,066	+		MIT1002_01195	0.78	-0.4
1,312,121	-		MIT1002_01195	0.81	-1.0
1,312,164	-		MIT1002_01195	0.83	-0.1
1,312,166	+		MIT1002_01195	0.83	-0.3
1,312,166	+		MIT1002_01195	0.83	-0.3
1,312,174	-		MIT1002_01195	0.83	-1.1
1,312,244	-		MIT1002_01195	0.87	-0.1
1,312,373	+				-1.7
1,312,373	-				-1.1
1,312,382	+				+0.4
1,312,402	+				-2.4
1,312,402	+				-2.5
1,312,410	-				+0.5
1,312,410	-				+0.4
1,312,410	-				-2.4
1,312,410	-				-3.4
1,312,412	-				+0.6
1,312,442	-				+0.7
1,312,565	-				-0.6
1,312,670	-		MIT1002_01196	0.12	-0.9
1,312,677	+		MIT1002_01196	0.13	+0.8
1,312,743	-		MIT1002_01196	0.23	-1.1
1,312,764	-		MIT1002_01196	0.26	-3.0
1,312,788	-		MIT1002_01196	0.30	-0.0
1,312,795	-		MIT1002_01196	0.31	-0.1
1,312,802	-		MIT1002_01196	0.32	-1.9
1,312,862	+		MIT1002_01196	0.41	-0.6
1,312,901	-		MIT1002_01196	0.47	-0.9
1,312,922	+		MIT1002_01196	0.50	+0.7
1,312,930	-		MIT1002_01196	0.51	+0.4
1,312,932	+		MIT1002_01196	0.52	-1.0
1,312,932	+		MIT1002_01196	0.52	-0.5
1,312,940	-		MIT1002_01196	0.53	-1.6
1,313,005	-		MIT1002_01196	0.62	+2.9
1,313,022	+		MIT1002_01196	0.65	-1.4
1,313,030	-		MIT1002_01196	0.66	-0.8
1,313,051	-		MIT1002_01196	0.69	+0.2
1,313,057	+		MIT1002_01196	0.70	+0.1
1,313,057	+		MIT1002_01196	0.70	-1.5
1,313,057	+		MIT1002_01196	0.70	+0.0
1,313,057	+		MIT1002_01196	0.70	+0.7
1,313,060	-		MIT1002_01196	0.71	+1.5
1,313,065	-		MIT1002_01196	0.71	-1.6
1,313,065	-		MIT1002_01196	0.71	+0.7
1,313,082	+		MIT1002_01196	0.74	+0.1
1,313,082	+		MIT1002_01196	0.74	+1.1
1,313,082	+		MIT1002_01196	0.74	+0.3
1,313,082	+		MIT1002_01196	0.74	-1.0
1,313,090	-		MIT1002_01196	0.75	-1.2
1,313,090	-		MIT1002_01196	0.75	-1.9
1,313,095	-		MIT1002_01196	0.76	-1.3
1,313,095	-		MIT1002_01196	0.76	-2.5
1,313,097	+		MIT1002_01196	0.76	-1.6
1,313,105	-		MIT1002_01196	0.77	-2.1
1,313,105	-		MIT1002_01196	0.77	-1.1
1,313,105	-		MIT1002_01196	0.77	+1.1
1,313,120	-		MIT1002_01196	0.80	-1.8
1,313,194	+				-1.1
1,313,199	+				+1.3
1,313,202	-				-1.8
1,313,228	+				-0.7
1,313,253	+				+0.8
1,313,263	+				-0.7
1,313,263	+				+1.6
1,313,271	-				+0.2
1,313,271	-				-0.0
1,313,271	-				-1.1
1,313,334	-				+0.5
1,313,383	-				+1.9
1,313,405	-				-0.2
1,313,405	-				-0.7
1,313,431	-				+1.1
1,313,434	-				+0.8
1,313,444	+				+1.8
1,313,444	+				-0.7
1,313,444	+				+0.2
1,313,450	-				-0.3
1,313,450	-				-1.9
1,313,452	-				-2.7
1,313,452	-				+1.6
1,313,452	-				+0.3
1,313,452	-				-0.9
1,313,456	+				-0.2
1,313,456	+				-0.0
1,313,492	+				+0.2
1,313,500	-				-0.0