Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00968

Experiment: monoculture; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 5
1,073,432	+				+1.9
1,073,447	-				+0.3
1,073,488	-				+0.5
1,073,537	+				-0.5
1,073,968	+				+0.2
1,073,984	+				+1.0
1,074,005	-				+0.5
1,074,086	+				-0.4
1,074,094	-				+0.3
1,074,168	-		MIT1002_00968	0.14	+0.0
1,074,357	+		MIT1002_00968	0.28	-0.9
1,074,519	+		MIT1002_00968	0.40	-0.8
1,074,577	+		MIT1002_00968	0.45	-2.2
1,074,709	+		MIT1002_00968	0.55	-2.3
1,074,726	+		MIT1002_00968	0.56	-0.6
1,074,811	+		MIT1002_00968	0.63	-0.4
1,074,819	-		MIT1002_00968	0.63	-1.6
1,074,821	-		MIT1002_00968	0.63	-1.4
1,074,849	-		MIT1002_00968	0.66	-2.6
1,074,988	+		MIT1002_00968	0.76	+0.6
1,075,001	-		MIT1002_00968	0.77	+0.2
1,075,039	+		MIT1002_00968	0.80	-1.2
1,075,053	+		MIT1002_00968	0.81	-2.8
1,075,149	-		MIT1002_00968	0.88	-0.3
1,075,166	-		MIT1002_00968	0.90	-0.9
1,075,176	+				+0.6
1,075,176	+				-0.6
1,075,184	-				-1.1
1,075,231	-				+1.5
1,075,245	+				-0.4
1,075,253	-				-2.0
1,075,253	-				+0.9
1,075,311	+				+1.1
1,075,319	-				+2.8
1,075,319	-				-0.3
1,075,338	-				+1.3
1,075,349	+				-0.2
1,075,447	-		MIT1002_00969	0.15	+1.3
1,075,448	+		MIT1002_00969	0.15	+0.7
1,075,448	+		MIT1002_00969	0.15	+2.2
1,075,456	-		MIT1002_00969	0.16	-0.7
1,075,456	-		MIT1002_00969	0.16	-1.5
1,075,456	-		MIT1002_00969	0.16	+0.4
1,075,456	-		MIT1002_00969	0.16	+0.5
1,075,456	-		MIT1002_00969	0.16	+0.4
1,075,511	+		MIT1002_00969	0.22	-0.8
1,075,518	-		MIT1002_00969	0.23	+0.9
1,075,524	+		MIT1002_00969	0.23	-1.5
1,075,554	+		MIT1002_00969	0.27	+1.2
1,075,562	-		MIT1002_00969	0.27	+2.0
1,075,573	+		MIT1002_00969	0.29	-0.6
1,075,595	+		MIT1002_00969	0.31	+1.3
1,075,595	+		MIT1002_00969	0.31	+1.9
1,075,595	+		MIT1002_00969	0.31	-0.1
1,075,603	-		MIT1002_00969	0.32	+1.3
1,075,603	-		MIT1002_00969	0.32	+1.4
1,075,683	+		MIT1002_00969	0.40	+0.8
1,075,745	-		MIT1002_00969	0.47	+0.7
1,075,752	+		MIT1002_00969	0.48	+0.5
1,075,889	+		MIT1002_00969	0.62	+1.1
1,075,969	-		MIT1002_00969	0.70	+1.0