Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00955

Experiment: monoculture; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 5
1,060,182	+				+0.5
1,060,307	+				-0.7
1,060,351	+				+2.5
1,060,370	-				+2.1
1,060,411	+				-0.2
1,060,411	+				+0.2
1,060,508	+				-0.1
1,060,516	+				+0.9
1,060,544	+				+0.2
1,060,584	+		MIT1002_00954	0.14	-1.7
1,060,640	+		MIT1002_00954	0.24	+1.0
1,060,648	-		MIT1002_00954	0.26	-0.3
1,060,688	-		MIT1002_00954	0.33	-0.2
1,060,690	+		MIT1002_00954	0.34	+0.4
1,060,709	+		MIT1002_00954	0.37	-1.6
1,060,751	+		MIT1002_00954	0.45	-1.0
1,060,756	+		MIT1002_00954	0.46	-0.2
1,060,759	-		MIT1002_00954	0.46	-0.8
1,060,764	-		MIT1002_00954	0.47	-0.9
1,060,768	+		MIT1002_00954	0.48	-0.4
1,060,778	+		MIT1002_00954	0.50	-0.5
1,060,788	+		MIT1002_00954	0.52	-1.9
1,060,814	+		MIT1002_00954	0.56	+0.9
1,060,867	+		MIT1002_00954	0.66	+1.4
1,060,984	+		MIT1002_00954	0.88	-1.4
1,061,025	+				-0.5
1,061,159	+				-0.0
1,061,318	+		MIT1002_00955	0.14	+0.7
1,061,716	-		MIT1002_00955	0.52	+0.5
1,061,716	-		MIT1002_00955	0.52	-0.7
1,061,819	-		MIT1002_00955	0.62	-0.5
1,061,846	+		MIT1002_00955	0.65	-0.4
1,061,909	+		MIT1002_00955	0.71	-1.4
1,062,041	+		MIT1002_00955	0.83	+0.2
1,062,047	-		MIT1002_00955	0.84	+1.2
1,062,073	-		MIT1002_00955	0.86	-2.3
1,062,318	+				-0.4
1,062,380	-				-0.6
1,062,455	+				-0.4
1,062,471	+				+0.2
1,062,497	+				+0.8
1,062,497	+				+0.5
1,062,497	+				-2.0
1,062,505	-				+3.1
1,062,505	-				-0.4
1,062,520	-				+2.9
1,062,568	-				-1.5
1,062,646	-		MIT1002_00956	0.14	-0.5
1,062,670	+		MIT1002_00956	0.17	-1.1
1,062,678	-		MIT1002_00956	0.18	-0.1
1,062,687	+		MIT1002_00956	0.19	+2.5
1,062,729	+		MIT1002_00956	0.24	+0.9
1,062,737	-		MIT1002_00956	0.25	-1.3
1,062,737	-		MIT1002_00956	0.25	-1.0
1,062,749	-		MIT1002_00956	0.26	+0.1
1,062,803	-		MIT1002_00956	0.33	+1.0
1,062,803	-		MIT1002_00956	0.33	-1.0
1,062,841	-		MIT1002_00956	0.38	-1.2
1,062,889	+		MIT1002_00956	0.43	+0.9
1,062,899	-		MIT1002_00956	0.45	+0.2
1,063,028	+		MIT1002_00956	0.60	+0.6
1,063,030	+		MIT1002_00956	0.61	+0.2
1,063,030	+		MIT1002_00956	0.61	-0.6
1,063,030	+		MIT1002_00956	0.61	+0.5
1,063,030	+		MIT1002_00956	0.61	-0.8
1,063,030	+		MIT1002_00956	0.61	+1.5
1,063,030	+		MIT1002_00956	0.61	+0.6
1,063,030	+		MIT1002_00956	0.61	-0.2
1,063,030	+		MIT1002_00956	0.61	-0.4
1,063,038	-		MIT1002_00956	0.62	+2.5
1,063,038	-		MIT1002_00956	0.62	-0.8
1,063,038	-		MIT1002_00956	0.62	+3.7
1,063,038	-		MIT1002_00956	0.62	+0.3
1,063,048	-		MIT1002_00956	0.63	+0.6
1,063,136	-		MIT1002_00956	0.73	+0.5
1,063,174	+		MIT1002_00956	0.78	-0.6
1,063,174	+		MIT1002_00956	0.78	+0.7
1,063,174	+		MIT1002_00956	0.78	-0.8