Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00086

Experiment: monoculture; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 5
91,590	+		MIT1002_00084	0.90	-1.9
91,596	-				-0.2
91,619	+				+1.0
91,632	-				+0.6
91,632	-				+0.8
91,634	-				-0.8
91,634	-				+1.0
91,752	+				+0.4
91,779	+				+0.0
91,779	+				+0.6
91,950	-				-1.2
91,982	+				+2.0
92,007	+				-1.0
92,015	-				-1.3
92,021	+				-1.7
92,021	+				-3.0
92,021	+				+0.5
92,060	+		MIT1002_00085	0.17	-1.0
92,128	-		MIT1002_00085	0.30	-0.6
92,165	+		MIT1002_00085	0.37	+0.8
92,165	+		MIT1002_00085	0.37	-0.6
92,183	-		MIT1002_00085	0.40	-0.0
92,265	+		MIT1002_00085	0.56	-1.0
92,309	-		MIT1002_00085	0.64	-0.5
92,376	-		MIT1002_00085	0.77	+1.5
92,383	-		MIT1002_00085	0.79	-0.9
92,426	-		MIT1002_00085	0.87	+0.5
92,454	+				+0.1
92,462	-				-0.9
92,462	-				-1.9
92,462	-				+0.0
92,462	-				-0.7
92,499	+				+1.7
92,499	+				-1.2
92,499	+				-1.1
92,499	+				+1.7
92,499	+				+0.8
92,499	+				-1.2
92,499	+				-1.0
92,499	+				-0.3
92,499	+				+1.0
92,507	-				-2.3
92,507	-				+1.1
92,507	-				+2.2
92,507	-				-0.5
92,507	-				-0.3
92,507	-				+0.4
92,507	-				+0.9
92,512	+				+0.4
92,512	+				+2.8
92,512	+				+0.1
92,512	+				-0.9
92,520	-				+1.5
92,520	-				-2.5
92,520	-				+1.7
92,520	-				+0.1
92,624	-				+0.6
92,626	+				-0.2
92,626	+				-0.9
92,717	+		MIT1002_00086	0.12	-1.1
92,988	+		MIT1002_00086	0.34	-0.4
92,996	-		MIT1002_00086	0.35	-0.4
93,021	-		MIT1002_00086	0.37	-0.1
93,033	-		MIT1002_00086	0.38	+1.7
93,051	-		MIT1002_00086	0.39	+0.1
93,058	-		MIT1002_00086	0.40	-0.7
93,100	+		MIT1002_00086	0.43	-0.3
93,161	+		MIT1002_00086	0.48	+0.9
93,161	+		MIT1002_00086	0.48	-0.2
93,187	-		MIT1002_00086	0.51	+2.4
93,187	-		MIT1002_00086	0.51	+0.2
93,212	+		MIT1002_00086	0.53	+1.0
93,232	-		MIT1002_00086	0.54	+0.6
93,245	+		MIT1002_00086	0.55	+1.6
93,253	-		MIT1002_00086	0.56	+1.4
93,253	-		MIT1002_00086	0.56	-0.5
93,253	-		MIT1002_00086	0.56	-1.4
93,255	+		MIT1002_00086	0.56	+0.3
93,256	+		MIT1002_00086	0.56	-1.3
93,256	+		MIT1002_00086	0.56	-1.1
93,256	+		MIT1002_00086	0.56	-0.3
93,256	+		MIT1002_00086	0.56	+1.1
93,256	+		MIT1002_00086	0.56	-1.3
93,264	-		MIT1002_00086	0.57	+2.5
93,264	-		MIT1002_00086	0.57	-1.7
93,264	-		MIT1002_00086	0.57	-0.8
93,305	-		MIT1002_00086	0.60	+1.2
93,353	+		MIT1002_00086	0.64	-0.9
93,353	+		MIT1002_00086	0.64	-0.5
93,393	-		MIT1002_00086	0.67	+2.1
93,527	+		MIT1002_00086	0.78	+1.3
93,540	+		MIT1002_00086	0.80	+1.0
93,555	+		MIT1002_00086	0.81	+0.8
93,555	+		MIT1002_00086	0.81	+0.4
93,555	+		MIT1002_00086	0.81	-0.2
93,556	+		MIT1002_00086	0.81	+0.0
93,556	+		MIT1002_00086	0.81	-1.2
93,564	-		MIT1002_00086	0.81	-2.1
93,564	-		MIT1002_00086	0.81	+0.8
93,564	-		MIT1002_00086	0.81	-1.3
93,592	+		MIT1002_00086	0.84	-1.1
93,592	+		MIT1002_00086	0.84	+1.6
93,592	+		MIT1002_00086	0.84	+0.2
93,600	-		MIT1002_00086	0.84	+0.4
93,600	-		MIT1002_00086	0.84	+1.6
93,620	-		MIT1002_00086	0.86	-1.0
93,640	-		MIT1002_00086	0.88	+0.5
93,826	-				+0.1
94,101	-		MIT1002_00087	0.11	-0.9
94,142	+		MIT1002_00087	0.15	+0.6
94,142	+		MIT1002_00087	0.15	-0.5
94,142	+		MIT1002_00087	0.15	-1.6
94,150	-		MIT1002_00087	0.16	-1.5
94,150	-		MIT1002_00087	0.16	-0.9
94,288	+		MIT1002_00087	0.31	+0.5
94,296	-		MIT1002_00087	0.32	+0.1
94,308	-		MIT1002_00087	0.33	-0.4
94,339	-		MIT1002_00087	0.36	-1.4
94,344	+		MIT1002_00087	0.37	-0.6
94,362	-		MIT1002_00087	0.39	-0.7
94,367	-		MIT1002_00087	0.39	+0.0
94,507	+		MIT1002_00087	0.55	+0.4
94,507	+		MIT1002_00087	0.55	-1.0
94,515	-		MIT1002_00087	0.55	+0.2
94,515	-		MIT1002_00087	0.55	-0.0
94,515	-		MIT1002_00087	0.55	+0.1
94,523	+		MIT1002_00087	0.56	+0.1
94,523	+		MIT1002_00087	0.56	-0.9
94,523	+		MIT1002_00087	0.56	+0.5
94,589	-		MIT1002_00087	0.63	+0.2
94,598	+		MIT1002_00087	0.64	+0.5
94,606	+		MIT1002_00087	0.65	+0.0
94,683	-		MIT1002_00087	0.74	+0.6
94,696	-		MIT1002_00087	0.75	+0.3
94,725	+		MIT1002_00087	0.78	+0.3
94,732	-		MIT1002_00087	0.79	+1.9
94,733	-		MIT1002_00087	0.79	-0.4
94,733	-		MIT1002_00087	0.79	-0.1
94,744	+		MIT1002_00087	0.80	+0.3