Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_04010

Experiment: monoculture; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 4
4,495,662	+				-0.4
4,495,687	+				+1.1
4,495,820	-				+1.3
4,495,951	+				+0.3
4,495,953	+				-0.0
4,495,968	+				+0.0
4,495,976	+		MIT1002_04010	0.11	-0.3
4,495,976	-		MIT1002_04010	0.11	-1.5
4,495,983	+		MIT1002_04010	0.14	+1.3
4,495,990	-		MIT1002_04010	0.17	+0.4
4,495,991	-		MIT1002_04010	0.17	+1.6
4,496,028	+		MIT1002_04010	0.32	+0.8
4,496,029	-		MIT1002_04010	0.32	-0.2
4,496,071	+		MIT1002_04010	0.49	-1.1
4,496,077	-		MIT1002_04010	0.51	-0.4
4,496,107	+		MIT1002_04010	0.63	-0.6
4,496,113	-		MIT1002_04010	0.65	+1.6
4,496,113	-		MIT1002_04010	0.65	+0.1
4,496,233	-				-1.4
4,496,358	-				-0.2
4,496,409	-				-1.0
4,496,423	+				-1.9
4,496,431	-				+1.3
4,496,498	-		MIT1002_04011	0.22	-0.3
4,496,504	+		MIT1002_04011	0.23	+0.5
4,496,603	+		MIT1002_04011	0.43	+0.7
4,496,611	-		MIT1002_04011	0.45	+0.3
4,496,697	+		MIT1002_04011	0.63	-0.3
4,496,765	+		MIT1002_04011	0.77	-1.5
4,496,883	+				+1.1
4,496,889	-				-0.2
4,496,891	-				-1.4
4,496,901	-				+2.3
4,496,910	-				-0.5
4,496,985	+				+1.5
4,496,991	-				-0.5
4,496,993	-				-1.3
4,497,162	+				-1.9
4,497,183	+				-1.4
4,497,199	+				-0.0