Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03867

Experiment: monoculture; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 4
4,333,038	+				+0.5
4,333,053	+				+0.1
4,333,063	+				-0.9
4,333,063	+				+2.0
4,333,063	+				+0.5
4,333,063	+				-2.1
4,333,063	+				-1.8
4,333,063	+				+0.2
4,333,071	-				-0.5
4,333,071	-				+0.2
4,333,301	+				+0.1
4,333,356	+				+0.0
4,333,464	-				+1.4
4,333,485	-				+1.1
4,333,536	+				+0.3
4,333,575	-				+0.6
4,333,653	+				-0.5
4,333,756	+				+0.4
4,333,756	+				-1.2
4,333,769	-				-0.3
4,333,818	-				+0.2
4,333,877	-				+0.1
4,333,882	-				+1.4
4,333,886	+				+0.4
4,333,908	-				+0.2
4,333,915	-				-0.3
4,333,922	+				-0.4
4,334,120	+				-0.6
4,334,120	+				-2.1
4,334,120	+				-0.1
4,334,182	-		MIT1002_03867	0.13	-0.7
4,334,182	-		MIT1002_03867	0.13	-0.5
4,334,201	+		MIT1002_03867	0.14	+1.0
4,334,203	+		MIT1002_03867	0.15	-1.2
4,334,211	-		MIT1002_03867	0.15	-2.2
4,334,211	-		MIT1002_03867	0.15	+0.6
4,334,216	-		MIT1002_03867	0.16	-1.6
4,334,223	+		MIT1002_03867	0.16	-2.3
4,334,224	-		MIT1002_03867	0.16	-1.0
4,334,224	-		MIT1002_03867	0.16	-0.4
4,334,279	-		MIT1002_03867	0.21	+0.7
4,334,279	-		MIT1002_03867	0.21	+0.0
4,334,393	-		MIT1002_03867	0.30	-0.5
4,334,403	-		MIT1002_03867	0.31	-1.8
4,334,425	-		MIT1002_03867	0.33	-1.9
4,334,425	-		MIT1002_03867	0.33	-0.2
4,334,425	-		MIT1002_03867	0.33	-0.2
4,334,442	+		MIT1002_03867	0.34	+1.0
4,334,442	+		MIT1002_03867	0.34	-0.6
4,334,442	+		MIT1002_03867	0.34	+0.4
4,334,442	+		MIT1002_03867	0.34	-0.6
4,334,450	-		MIT1002_03867	0.35	+0.5
4,334,450	-		MIT1002_03867	0.35	+0.2
4,334,450	-		MIT1002_03867	0.35	-1.1
4,334,450	-		MIT1002_03867	0.35	-0.6
4,334,450	-		MIT1002_03867	0.35	+0.1
4,334,465	+		MIT1002_03867	0.36	+0.5
4,334,518	-		MIT1002_03867	0.41	-0.7
4,334,518	-		MIT1002_03867	0.41	-0.9
4,334,558	-		MIT1002_03867	0.44	+1.0
4,334,560	-		MIT1002_03867	0.44	+0.5
4,334,575	+		MIT1002_03867	0.45	-0.0
4,334,576	-		MIT1002_03867	0.45	+0.8
4,334,607	-		MIT1002_03867	0.48	+0.9
4,334,629	-		MIT1002_03867	0.50	+0.3
4,334,646	+		MIT1002_03867	0.51	-0.4
4,334,654	-		MIT1002_03867	0.52	-1.3
4,334,673	-		MIT1002_03867	0.53	+0.2
4,334,784	+		MIT1002_03867	0.62	+0.3
4,334,785	-		MIT1002_03867	0.63	+0.2
4,334,850	+		MIT1002_03867	0.68	+0.5
4,334,894	+		MIT1002_03867	0.72	-1.1
4,334,927	-		MIT1002_03867	0.74	-0.4
4,334,995	-		MIT1002_03867	0.80	+0.6
4,335,072	+		MIT1002_03867	0.86	+0.3
4,335,093	+		MIT1002_03867	0.88	-1.1
4,335,098	+		MIT1002_03867	0.88	+0.9
4,335,104	+		MIT1002_03867	0.89	+1.9
4,335,148	+				-0.3
4,335,158	+				+0.4
4,335,213	-				+0.3
4,335,220	+				+1.1
4,335,228	-				+0.6
4,335,228	-				-1.9
4,335,228	-				-0.6
4,335,234	+				+0.5
4,335,234	+				+0.3
4,335,234	+				-1.3
4,335,242	-				+0.5
4,335,242	-				+1.2
4,335,302	+				-2.5
4,335,311	-				-0.6
4,335,327	+				+0.7
4,335,404	-				+0.0
4,335,406	+				+1.3
4,335,406	+				-2.3
4,335,414	-				-0.1
4,335,414	-				+0.5
4,335,433	-				+1.4
4,335,433	-				-2.1
4,335,433	-				+0.1
4,335,440	+				-0.3
4,335,440	+				+0.8
4,335,458	-				-0.2
4,335,458	-				-2.0
4,335,477	-				-0.5
4,335,514	+				-0.4
4,335,722	+				-1.0
4,335,737	-				+2.1
4,335,737	-				+1.5
4,335,758	-				-1.5
4,335,758	-				+1.0
4,335,768	-				+1.2
4,335,795	+				+0.0
4,335,795	+				+0.4
4,335,795	+				+0.3
4,335,795	+				-0.5
4,335,795	+				-2.7
4,335,795	+				-2.2
4,335,803	-				+1.1
4,335,803	-				-0.2
4,335,803	-				+0.3
4,335,803	-				-0.2
4,335,810	-		MIT1002_03868	0.11	-1.4
4,335,840	+		MIT1002_03868	0.14	-0.3
4,335,848	-		MIT1002_03868	0.16	+0.1
4,335,848	-		MIT1002_03868	0.16	-2.4
4,335,853	+		MIT1002_03868	0.16	-0.5
4,335,853	-		MIT1002_03868	0.16	+1.8
4,335,910	-		MIT1002_03868	0.24	+2.7
4,335,927	+		MIT1002_03868	0.26	+0.8
4,335,935	-		MIT1002_03868	0.27	+1.6
4,335,943	+		MIT1002_03868	0.28	+0.2
4,335,951	-		MIT1002_03868	0.29	-0.3
4,335,951	-		MIT1002_03868	0.29	-3.1
4,335,951	-		MIT1002_03868	0.29	+1.4
4,335,951	-		MIT1002_03868	0.29	-0.1
4,335,951	-		MIT1002_03868	0.29	-0.7
4,335,951	-		MIT1002_03868	0.29	+0.4
4,335,953	+		MIT1002_03868	0.29	-1.1
4,335,973	+		MIT1002_03868	0.32	+2.0
4,336,032	+		MIT1002_03868	0.39	-0.6
4,336,032	+		MIT1002_03868	0.39	+1.6
4,336,040	-		MIT1002_03868	0.40	-1.9
4,336,138	-		MIT1002_03868	0.53	-0.2
4,336,213	+		MIT1002_03868	0.63	+0.3