Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03499

Experiment: monoculture; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 4
3,908,634	-		MIT1002_03497	0.85	-0.4
3,908,635	-		MIT1002_03497	0.86	-1.1
3,908,645	-		MIT1002_03497	0.87	-0.9
3,908,648	-		MIT1002_03497	0.87	-0.7
3,908,685	+				-1.9
3,908,700	-				-1.5
3,908,726	-				-0.4
3,908,800	-				+0.4
3,908,800	-				-0.6
3,908,840	+				+0.2
3,909,071	-		MIT1002_03498	0.14	+1.5
3,909,091	-		MIT1002_03498	0.18	+1.2
3,909,101	+		MIT1002_03498	0.19	-0.8
3,909,132	+		MIT1002_03498	0.24	+0.4
3,909,140	-		MIT1002_03498	0.25	-0.5
3,909,140	-		MIT1002_03498	0.25	+1.8
3,909,140	-		MIT1002_03498	0.25	+0.5
3,909,229	-		MIT1002_03498	0.40	-1.0
3,909,245	-		MIT1002_03498	0.42	-0.2
3,909,344	-		MIT1002_03498	0.58	+1.5
3,909,391	-		MIT1002_03498	0.66	-0.4
3,909,420	+		MIT1002_03498	0.70	-0.2
3,909,420	+		MIT1002_03498	0.70	-1.6
3,909,420	+		MIT1002_03498	0.70	-0.6
3,909,420	+		MIT1002_03498	0.70	-0.5
3,909,428	-		MIT1002_03498	0.72	-1.3
3,909,441	+		MIT1002_03498	0.74	-0.4
3,909,443	+		MIT1002_03498	0.74	-1.1
3,909,474	+		MIT1002_03498	0.79	+0.5
3,909,476	+		MIT1002_03498	0.79	-0.3
3,909,481	+		MIT1002_03498	0.80	-0.4
3,909,579	-				-0.4
3,909,591	-				-1.9
3,909,612	+				+0.7
3,909,620	-				-1.2
3,909,651	-				-1.4
3,909,750	+		MIT1002_03499	0.11	-2.7
3,909,778	-		MIT1002_03499	0.13	+0.2
3,909,945	-		MIT1002_03499	0.27	-1.7
3,909,945	-		MIT1002_03499	0.27	+2.8
3,910,095	+		MIT1002_03499	0.39	-0.3
3,910,258	-		MIT1002_03499	0.53	+2.1
3,910,274	+		MIT1002_03499	0.54	-0.5
3,910,282	-		MIT1002_03499	0.55	-0.4
3,910,474	+		MIT1002_03499	0.71	+0.2
3,910,489	+		MIT1002_03499	0.72	-0.3
3,910,629	-		MIT1002_03499	0.83	+0.5
3,910,640	+		MIT1002_03499	0.84	+2.1
3,910,647	+		MIT1002_03499	0.85	+0.5
3,910,648	-		MIT1002_03499	0.85	+1.6
3,910,655	-		MIT1002_03499	0.86	-0.3
3,910,781	+				-0.5
3,910,781	+				-1.5
3,910,789	-				+0.1
3,910,801	+				+0.1
3,910,920	-				+1.1
3,910,920	-				-0.3
3,911,097	+		MIT1002_03500	0.12	+0.5
3,911,097	+		MIT1002_03500	0.12	+0.4
3,911,107	+		MIT1002_03500	0.13	+1.4
3,911,138	+		MIT1002_03500	0.17	-0.4
3,911,357	+		MIT1002_03500	0.43	+0.1
3,911,414	+		MIT1002_03500	0.50	+2.8
3,911,471	+		MIT1002_03500	0.56	-0.5
3,911,498	-		MIT1002_03500	0.60	-0.8
3,911,531	+		MIT1002_03500	0.63	-0.1
3,911,565	-		MIT1002_03500	0.68	-0.8
3,911,691	-		MIT1002_03500	0.82	+2.3