Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03398

Experiment: monoculture; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 4
3,801,545	-		MIT1002_03396	0.64	+0.6
3,801,570	-		MIT1002_03396	0.75	+0.5
3,801,593	+		MIT1002_03396	0.85	+0.1
3,801,595	+		MIT1002_03396	0.86	+0.9
3,801,603	-		MIT1002_03396	0.89	-0.9
3,801,654	+				-0.1
3,801,654	+				-1.3
3,801,654	+				-0.3
3,801,662	-				-0.3
3,801,703	+				-1.4
3,801,703	+				-0.0
3,801,704	-				-0.5
3,801,704	-				+0.2
3,801,784	+		MIT1002_03397	0.12	+0.1
3,801,789	+		MIT1002_03397	0.14	+1.1
3,801,801	+		MIT1002_03397	0.19	+2.5
3,801,801	+		MIT1002_03397	0.19	+0.2
3,801,801	+		MIT1002_03397	0.19	-1.0
3,801,801	+		MIT1002_03397	0.19	+0.3
3,801,801	+		MIT1002_03397	0.19	-0.6
3,801,801	+		MIT1002_03397	0.19	-0.0
3,801,801	+		MIT1002_03397	0.19	+0.3
3,801,801	+		MIT1002_03397	0.19	+1.2
3,801,801	+		MIT1002_03397	0.19	+1.0
3,801,808	+		MIT1002_03397	0.21	-0.0
3,801,809	-		MIT1002_03397	0.22	+0.3
3,801,809	-		MIT1002_03397	0.22	-0.1
3,801,809	-		MIT1002_03397	0.22	+2.5
3,801,809	-		MIT1002_03397	0.22	-1.7
3,801,809	-		MIT1002_03397	0.22	+0.5
3,801,809	-		MIT1002_03397	0.22	-0.7
3,801,809	-		MIT1002_03397	0.22	-1.0
3,801,810	-		MIT1002_03397	0.22	-0.2
3,801,845	+		MIT1002_03397	0.35	-0.6
3,801,845	+		MIT1002_03397	0.35	+0.3
3,801,845	+		MIT1002_03397	0.35	-0.9
3,802,126	+				-0.3
3,802,225	+				-1.4
3,802,225	+				+1.3
3,802,233	-				+0.5
3,802,235	+				+0.1
3,802,235	+				-1.5
3,802,235	+				-0.4
3,802,243	-				-0.1
3,802,243	-				+1.1
3,802,243	-				+0.1
3,802,288	+				+0.1
3,802,507	-				-0.9
3,802,550	-		MIT1002_03398	0.10	-0.2
3,802,615	-		MIT1002_03398	0.25	-0.4
3,802,752	-		MIT1002_03398	0.55	+0.9
3,802,830	-		MIT1002_03398	0.72	+1.2
3,802,840	-		MIT1002_03398	0.74	+1.2
3,802,913	+				+0.3
3,802,921	-				-0.3
3,802,944	-				-0.4
3,802,944	-				-0.3
3,802,955	+				+1.5
3,803,112	+				-1.0
3,803,172	+		MIT1002_03399	0.15	-0.9
3,803,175	-		MIT1002_03399	0.16	+1.1
3,803,180	-		MIT1002_03399	0.16	+1.6
3,803,216	-		MIT1002_03399	0.19	-0.4
3,803,243	+		MIT1002_03399	0.22	+0.7
3,803,265	-		MIT1002_03399	0.24	-1.5
3,803,348	+		MIT1002_03399	0.32	+0.9
3,803,348	+		MIT1002_03399	0.32	-0.0
3,803,348	+		MIT1002_03399	0.32	+0.1
3,803,348	+		MIT1002_03399	0.32	+2.5
3,803,565	+		MIT1002_03399	0.52	+0.9
3,803,565	+		MIT1002_03399	0.52	-1.2
3,803,573	-		MIT1002_03399	0.53	-1.6
3,803,598	+		MIT1002_03399	0.55	-0.7
3,803,598	+		MIT1002_03399	0.55	-0.8
3,803,598	+		MIT1002_03399	0.55	+0.7
3,803,598	+		MIT1002_03399	0.55	+0.5
3,803,598	+		MIT1002_03399	0.55	+0.6
3,803,598	+		MIT1002_03399	0.55	+0.3
3,803,598	+		MIT1002_03399	0.55	+0.9
3,803,598	+		MIT1002_03399	0.55	-0.7
3,803,606	-		MIT1002_03399	0.56	+0.7
3,803,606	-		MIT1002_03399	0.56	-3.5
3,803,606	-		MIT1002_03399	0.56	+0.3
3,803,606	-		MIT1002_03399	0.56	+1.5
3,803,606	-		MIT1002_03399	0.56	-1.0
3,803,606	-		MIT1002_03399	0.56	-1.8
3,803,606	-		MIT1002_03399	0.56	+0.5
3,803,606	-		MIT1002_03399	0.56	-0.3
3,803,606	-		MIT1002_03399	0.56	-0.2
3,803,606	-		MIT1002_03399	0.56	-0.4
3,803,633	+		MIT1002_03399	0.58	+0.5
3,803,650	+		MIT1002_03399	0.60	-1.1
3,803,687	+		MIT1002_03399	0.63	-0.7
3,803,697	+		MIT1002_03399	0.64	-0.2
3,803,803	+		MIT1002_03399	0.74	+1.5
3,803,905	-		MIT1002_03399	0.83	+0.0