Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02961

Experiment: monoculture; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 4
3,291,598	-		MIT1002_02960	0.54	-0.5
3,291,615	+		MIT1002_02960	0.55	-0.7
3,291,627	+		MIT1002_02960	0.55	-2.0
3,291,674	+		MIT1002_02960	0.58	-0.4
3,291,682	-		MIT1002_02960	0.58	+0.5
3,291,703	+		MIT1002_02960	0.59	+0.7
3,291,722	+		MIT1002_02960	0.60	-0.8
3,291,722	+		MIT1002_02960	0.60	+0.3
3,291,969	-		MIT1002_02960	0.73	-0.1
3,291,972	+		MIT1002_02960	0.73	+0.7
3,291,980	-		MIT1002_02960	0.73	-0.5
3,292,039	+		MIT1002_02960	0.76	+0.6
3,292,047	-		MIT1002_02960	0.76	-0.8
3,292,047	-		MIT1002_02960	0.76	-0.1
3,292,047	-		MIT1002_02960	0.76	-0.2
3,292,149	+		MIT1002_02960	0.82	+1.8
3,292,153	+		MIT1002_02960	0.82	-0.8
3,292,180	+		MIT1002_02960	0.83	-0.2
3,292,180	+		MIT1002_02960	0.83	-1.1
3,292,188	-		MIT1002_02960	0.84	+0.6
3,292,236	+		MIT1002_02960	0.86	-0.8
3,292,254	-		MIT1002_02960	0.87	-1.2
3,292,317	+				+0.0
3,292,317	+				-0.2
3,292,448	+				-0.3
3,292,709	+		MIT1002_02961	0.15	+0.0
3,292,719	-		MIT1002_02961	0.16	+1.9
3,292,745	-		MIT1002_02961	0.19	+3.8
3,292,785	+		MIT1002_02961	0.24	+0.3
3,292,818	+		MIT1002_02961	0.27	+1.0
3,292,986	-		MIT1002_02961	0.47	+1.9
3,293,084	-		MIT1002_02961	0.59	+2.0
3,293,119	+		MIT1002_02961	0.63	+1.3
3,293,163	+		MIT1002_02961	0.68	+0.9
3,293,171	-		MIT1002_02961	0.69	-0.2
3,293,244	+		MIT1002_02961	0.78	-1.3
3,293,244	+		MIT1002_02961	0.78	+2.0
3,293,252	-		MIT1002_02961	0.79	+1.3
3,293,335	-		MIT1002_02961	0.89	+2.7
3,293,356	-				+1.9
3,293,407	-				+0.5
3,293,523	+		MIT1002_02962	0.38	+1.5
3,293,595	+		MIT1002_02962	0.72	+2.5
3,293,721	+				+3.2
3,293,799	+				+2.1
3,293,799	+				+1.3
3,293,799	+				+5.0
3,293,829	+				+0.0
3,293,998	+				+1.7
3,294,062	-		MIT1002_02963	0.11	+3.6
3,294,075	+		MIT1002_02963	0.11	+2.3
3,294,088	+		MIT1002_02963	0.11	+1.9
3,294,124	+		MIT1002_02963	0.12	+1.3
3,294,355	+		MIT1002_02963	0.20	+2.9
3,294,428	+		MIT1002_02963	0.22	+2.9