Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02911

Experiment: monoculture; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 4
3,235,166	+		MIT1002_02910	0.33	-0.1
3,235,167	+		MIT1002_02910	0.33	-0.7
3,235,167	+		MIT1002_02910	0.33	-1.1
3,235,167	+		MIT1002_02910	0.33	+0.0
3,235,175	-		MIT1002_02910	0.34	+1.3
3,235,295	+		MIT1002_02910	0.44	-1.2
3,235,396	+		MIT1002_02910	0.52	-0.4
3,235,406	-		MIT1002_02910	0.53	-0.5
3,235,411	+		MIT1002_02910	0.53	+0.4
3,235,522	+		MIT1002_02910	0.62	-1.0
3,235,614	-		MIT1002_02910	0.70	+0.4
3,235,625	-		MIT1002_02910	0.71	-0.6
3,235,662	+		MIT1002_02910	0.74	+2.7
3,235,689	+		MIT1002_02910	0.76	+0.6
3,235,750	-		MIT1002_02910	0.81	+0.6
3,235,764	-		MIT1002_02910	0.82	-1.0
3,235,782	-		MIT1002_02910	0.84	-0.9
3,236,039	+				-2.7
3,236,047	-				+0.5
3,236,154	+				+0.4
3,236,156	+				+0.0
3,236,281	+		MIT1002_02911	0.22	+1.6
3,236,281	+		MIT1002_02911	0.22	+1.0
3,236,286	-		MIT1002_02911	0.23	-0.5
3,236,289	-		MIT1002_02911	0.24	+1.3
3,236,389	+		MIT1002_02911	0.37	+1.1
3,236,420	+		MIT1002_02911	0.42	+0.0
3,236,420	+		MIT1002_02911	0.42	+0.4
3,236,435	-		MIT1002_02911	0.44	+0.9
3,236,483	+		MIT1002_02911	0.50	-1.3
3,236,491	-		MIT1002_02911	0.51	-0.2
3,236,541	+		MIT1002_02911	0.58	+0.0
3,236,562	+		MIT1002_02911	0.61	+0.0
3,236,570	-		MIT1002_02911	0.62	-0.9
3,236,614	-		MIT1002_02911	0.68	+1.1
3,236,652	+		MIT1002_02911	0.74	-0.2
3,236,697	+		MIT1002_02911	0.80	-1.4
3,236,702	+		MIT1002_02911	0.81	+0.1
3,236,743	-		MIT1002_02911	0.86	+0.0
3,236,813	-				+2.5
3,236,855	+				+0.0
3,236,918	+				-0.6
3,236,967	-				-0.7
3,236,996	+				+0.8
3,237,015	+				-0.3
3,237,023	-				-0.1
3,237,023	-				+0.3
3,237,023	-				+4.5
3,237,023	-				+0.1
3,237,023	-				+0.4
3,237,025	+				+0.3
3,237,030	+				-0.8
3,237,033	-				+0.7
3,237,033	-				-0.5
3,237,038	-				+0.8
3,237,075	+		MIT1002_02912	0.12	-0.7
3,237,077	+		MIT1002_02912	0.12	-0.1
3,237,085	-		MIT1002_02912	0.13	-1.8
3,237,085	-		MIT1002_02912	0.13	-0.2
3,237,085	-		MIT1002_02912	0.13	+0.5
3,237,120	+		MIT1002_02912	0.16	+0.1
3,237,120	+		MIT1002_02912	0.16	-0.8
3,237,128	+		MIT1002_02912	0.17	+1.6
3,237,128	+		MIT1002_02912	0.17	+1.6
3,237,130	+		MIT1002_02912	0.17	-0.2
3,237,157	+		MIT1002_02912	0.20	+0.1
3,237,173	-		MIT1002_02912	0.22	-0.4
3,237,184	-		MIT1002_02912	0.23	+0.8
3,237,212	+		MIT1002_02912	0.25	-0.7
3,237,293	+		MIT1002_02912	0.34	+0.5
3,237,433	-		MIT1002_02912	0.48	-0.3
3,237,482	+		MIT1002_02912	0.53	+0.7
3,237,544	-		MIT1002_02912	0.59	-0.5
3,237,563	+		MIT1002_02912	0.61	+0.5
3,237,563	+		MIT1002_02912	0.61	+0.5
3,237,571	-		MIT1002_02912	0.62	-0.1
3,237,610	+		MIT1002_02912	0.66	+0.8
3,237,610	+		MIT1002_02912	0.66	-0.4
3,237,618	-		MIT1002_02912	0.66	+1.3
3,237,656	-		MIT1002_02912	0.70	+0.3
3,237,664	+		MIT1002_02912	0.71	+0.3
3,237,665	-		MIT1002_02912	0.71	-1.4
3,237,665	-		MIT1002_02912	0.71	-1.6
3,237,667	+		MIT1002_02912	0.71	+1.3
3,237,667	+		MIT1002_02912	0.71	+0.3
3,237,667	+		MIT1002_02912	0.71	+0.0
3,237,667	+		MIT1002_02912	0.71	+1.1
3,237,672	-		MIT1002_02912	0.72	+2.1
3,237,672	-		MIT1002_02912	0.72	+0.5
3,237,675	-		MIT1002_02912	0.72	-0.2
3,237,710	+		MIT1002_02912	0.76	+2.7
3,237,777	+		MIT1002_02912	0.83	+0.6
3,237,793	-		MIT1002_02912	0.84	-0.7
3,237,801	+		MIT1002_02912	0.85	+1.1
3,237,817	-		MIT1002_02912	0.87	+0.3
3,237,819	-		MIT1002_02912	0.87	-0.6
3,237,820	+		MIT1002_02912	0.87	-0.4
3,237,828	-		MIT1002_02912	0.88	+1.1
3,237,828	-		MIT1002_02912	0.88	-0.3
3,237,835	+		MIT1002_02912	0.88	+2.0
3,237,835	+		MIT1002_02912	0.88	-0.5