Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02827

Experiment: monoculture; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 4
3,131,207	+		MIT1002_02826	0.67	+0.8
3,131,207	+		MIT1002_02826	0.67	+1.0
3,131,207	+		MIT1002_02826	0.67	+1.0
3,131,207	+		MIT1002_02826	0.67	-0.7
3,131,210	+		MIT1002_02826	0.67	-0.6
3,131,215	-		MIT1002_02826	0.68	-0.2
3,131,215	-		MIT1002_02826	0.68	-0.2
3,131,502	-		MIT1002_02826	0.77	+0.4
3,131,588	-		MIT1002_02826	0.80	-1.0
3,131,601	-		MIT1002_02826	0.81	-0.3
3,131,601	-		MIT1002_02826	0.81	-1.0
3,131,615	-		MIT1002_02826	0.81	-1.0
3,131,688	+		MIT1002_02826	0.84	-0.2
3,131,694	+		MIT1002_02826	0.84	-1.4
3,131,717	-		MIT1002_02826	0.85	-0.5
3,131,729	+		MIT1002_02826	0.85	+0.9
3,131,729	+		MIT1002_02826	0.85	+0.6
3,131,745	-		MIT1002_02826	0.86	+0.7
3,131,745	-		MIT1002_02826	0.86	-1.9
3,131,841	+		MIT1002_02826	0.89	-0.7
3,131,841	+		MIT1002_02826	0.89	+0.0
3,131,849	-		MIT1002_02826	0.89	-0.9
3,131,849	-		MIT1002_02826	0.89	+0.6
3,131,878	+				-0.8
3,131,884	+				+0.2
3,131,884	+				-0.3
3,131,886	-				-0.1
3,131,990	-				-0.6
3,132,033	-				-0.4
3,132,070	-				+0.4
3,132,104	+				+1.0
3,132,112	-				-0.4
3,132,325	+		MIT1002_02827	0.12	-1.7
3,132,361	+		MIT1002_02827	0.15	+0.6
3,132,361	+		MIT1002_02827	0.15	+0.6
3,132,369	-		MIT1002_02827	0.15	+0.3
3,132,389	+		MIT1002_02827	0.17	-0.3
3,132,526	+		MIT1002_02827	0.27	-1.8
3,132,526	+		MIT1002_02827	0.27	-0.1
3,132,533	+		MIT1002_02827	0.27	+1.5
3,132,534	-		MIT1002_02827	0.27	-0.9
3,132,551	+		MIT1002_02827	0.29	+0.1
3,132,624	+		MIT1002_02827	0.34	-0.8
3,132,673	-		MIT1002_02827	0.38	+0.1
3,132,673	-		MIT1002_02827	0.38	+0.5
3,132,679	-		MIT1002_02827	0.38	+0.2
3,132,745	+		MIT1002_02827	0.43	+0.1
3,132,745	+		MIT1002_02827	0.43	-0.2
3,132,745	+		MIT1002_02827	0.43	-0.6
3,132,753	-		MIT1002_02827	0.43	+0.1
3,132,753	-		MIT1002_02827	0.43	+0.4
3,132,824	-		MIT1002_02827	0.49	+0.0
3,132,824	-		MIT1002_02827	0.49	+0.2
3,132,930	+		MIT1002_02827	0.56	+0.6
3,132,930	+		MIT1002_02827	0.56	-0.1
3,132,938	-		MIT1002_02827	0.57	-0.7
3,132,938	-		MIT1002_02827	0.57	+1.3
3,132,938	-		MIT1002_02827	0.57	+1.8
3,132,938	-		MIT1002_02827	0.57	-0.3
3,133,051	+		MIT1002_02827	0.65	-0.6
3,133,059	-		MIT1002_02827	0.66	-1.0
3,133,081	-		MIT1002_02827	0.67	-1.4
3,133,117	+		MIT1002_02827	0.70	+0.7
3,133,125	-		MIT1002_02827	0.71	+0.2
3,133,135	+		MIT1002_02827	0.71	+1.0
3,133,231	-		MIT1002_02827	0.78	+0.6
3,133,358	+		MIT1002_02827	0.88	+0.6
3,133,366	-		MIT1002_02827	0.88	+0.3
3,133,400	+				+1.2
3,133,400	+				+0.2
3,133,463	-				-1.4
3,133,501	-				-1.8
3,133,521	+				+0.8
3,133,529	-				+0.3
3,133,641	+				+1.1
3,133,641	+				+0.6
3,133,649	-				+0.6
3,133,754	-		MIT1002_02828	0.20	+0.2
3,133,811	+		MIT1002_02828	0.27	-0.5
3,133,883	+		MIT1002_02828	0.34	-0.8
3,134,024	+		MIT1002_02828	0.50	-0.2
3,134,034	+		MIT1002_02828	0.51	+2.0
3,134,063	-		MIT1002_02828	0.54	-0.9
3,134,094	-		MIT1002_02828	0.57	-0.2
3,134,094	-		MIT1002_02828	0.57	+0.3
3,134,186	+		MIT1002_02828	0.67	-0.3
3,134,194	-		MIT1002_02828	0.68	-0.1
3,134,194	-		MIT1002_02828	0.68	-1.1
3,134,216	+		MIT1002_02828	0.71	+0.6
3,134,223	+		MIT1002_02828	0.71	-0.2
3,134,263	-		MIT1002_02828	0.76	+0.2
3,134,272	+		MIT1002_02828	0.77	+0.2
3,134,378	+		MIT1002_02828	0.88	-0.2
3,134,383	+		MIT1002_02828	0.89	+0.3
3,134,386	-		MIT1002_02828	0.89	-0.8
3,134,386	-		MIT1002_02828	0.89	-2.7
3,134,424	+				-1.3
3,134,433	-				+0.7
3,134,509	-				+0.1