Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02796
Experiment: monoculture; Experiment C, time point 4
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | monoculture; Experiment C, time point 4 |
---|---|---|---|---|---|
remove | |||||
3,099,417 | - | +1.2 | |||
3,099,681 | + | MIT1002_02795 | 0.54 | -0.5 | |
3,100,010 | - | -1.4 | |||
3,100,039 | - | MIT1002_02796 | 0.17 | -2.5 | |
3,100,057 | - | MIT1002_02796 | 0.22 | -1.5 | |
3,100,057 | - | MIT1002_02796 | 0.22 | -0.4 | |
3,100,110 | - | MIT1002_02796 | 0.37 | -1.5 | |
3,100,198 | - | MIT1002_02796 | 0.62 | +1.2 | |
3,100,198 | - | MIT1002_02796 | 0.62 | -0.2 | |
3,100,198 | - | MIT1002_02796 | 0.62 | -3.1 | |
3,100,198 | - | MIT1002_02796 | 0.62 | +0.2 | |
3,100,203 | - | MIT1002_02796 | 0.63 | -2.1 | |
3,100,256 | - | MIT1002_02796 | 0.78 | -1.6 | |
3,100,257 | - | MIT1002_02796 | 0.78 | -0.9 | |
3,100,339 | - | -0.5 |
Or see this region's nucleotide sequence