Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02613

Experiment: monoculture; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 4
2,910,580	+		MIT1002_02611	0.55	+0.5
2,910,598	+		MIT1002_02611	0.56	-0.9
2,910,733	+		MIT1002_02611	0.70	+0.5
2,910,741	-		MIT1002_02611	0.71	-1.4
2,910,899	-		MIT1002_02611	0.87	-1.9
2,910,901	+		MIT1002_02611	0.88	+0.3
2,910,909	-		MIT1002_02611	0.88	-1.3
2,910,967	-				-0.7
2,911,036	-				+0.1
2,911,098	+				+0.3
2,911,100	-				+0.3
2,911,101	-				+0.3
2,911,128	+				+0.7
2,911,136	-				-0.1
2,911,205	+				+3.1
2,911,312	-		MIT1002_02612	0.79	+0.8
2,911,371	+				+0.1
2,911,383	+				+1.0
2,911,386	-				+0.0
2,911,391	-				-0.8
2,911,438	-				-0.7
2,911,497	+				-1.7
2,911,538	+				+0.2
2,911,613	-		MIT1002_02613	0.34	-1.9
2,911,691	-		MIT1002_02613	0.68	-1.0
2,911,701	+		MIT1002_02613	0.72	-0.4
2,911,711	+		MIT1002_02613	0.76	+0.3
2,911,716	+		MIT1002_02613	0.78	-1.1
2,911,719	-		MIT1002_02613	0.80	+0.3
2,911,733	+		MIT1002_02613	0.86	-1.1
2,911,734	+		MIT1002_02613	0.86	+0.5
2,911,771	+				+0.2
2,911,811	-				-0.1
2,911,915	+				-0.2
2,911,944	+				+0.6
2,911,997	+				+0.4
2,912,007	+				-0.1
2,912,162	-				-0.2
2,912,162	-				-1.3
2,912,190	+				+1.0
2,912,193	-				-0.3
2,912,202	-				-0.3
2,912,272	+		MIT1002_02614	0.12	+0.2
2,912,299	-		MIT1002_02614	0.14	-2.1
2,912,314	+		MIT1002_02614	0.16	-0.2
2,912,316	+		MIT1002_02614	0.16	-1.3
2,912,385	+		MIT1002_02614	0.21	+0.7
2,912,393	-		MIT1002_02614	0.21	+0.4
2,912,445	+		MIT1002_02614	0.25	-0.2
2,912,536	+		MIT1002_02614	0.32	+0.5
2,912,562	+		MIT1002_02614	0.34	-0.3
2,912,626	-		MIT1002_02614	0.39	-1.2
2,912,745	-		MIT1002_02614	0.47	-1.5