Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02575

Experiment: monoculture; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 4
2,874,167	-		MIT1002_02574	0.38	-0.1
2,874,177	+		MIT1002_02574	0.39	-0.2
2,874,182	+		MIT1002_02574	0.39	+0.8
2,874,201	-		MIT1002_02574	0.40	-0.6
2,874,241	+		MIT1002_02574	0.43	-0.9
2,874,291	-		MIT1002_02574	0.46	+0.4
2,874,303	-		MIT1002_02574	0.47	-0.1
2,874,478	+		MIT1002_02574	0.59	-0.6
2,874,486	-		MIT1002_02574	0.60	-0.0
2,874,486	-		MIT1002_02574	0.60	-1.2
2,874,509	+		MIT1002_02574	0.61	-0.2
2,874,512	-		MIT1002_02574	0.62	-0.8
2,874,612	+		MIT1002_02574	0.68	-3.4
2,874,612	+		MIT1002_02574	0.68	-1.0
2,874,614	+		MIT1002_02574	0.69	+0.1
2,874,622	-		MIT1002_02574	0.69	-2.2
2,874,622	-		MIT1002_02574	0.69	-0.5
2,874,707	+		MIT1002_02574	0.75	-0.9
2,874,847	-		MIT1002_02574	0.84	+1.5
2,874,902	+		MIT1002_02574	0.88	-0.4
2,874,904	-		MIT1002_02574	0.88	-0.0
2,875,017	+				+0.8
2,875,018	+				+2.3
2,875,018	+				+1.0
2,875,018	+				-1.9
2,875,071	-				+1.4
2,875,071	-				-1.1
2,875,071	-				+0.9
2,875,093	+				-0.5
2,875,093	+				-0.2
2,875,101	-				+0.2
2,875,101	-				+0.4
2,875,101	-				+0.4
2,875,172	-				-0.2
2,875,242	+				-0.4
2,875,288	+				-2.3
2,875,288	+				+2.3
2,875,288	+				-0.3
2,875,288	+				+0.2
2,875,288	+				-2.5
2,875,288	+				+0.0
2,875,296	-		MIT1002_02575	0.10	-1.2
2,875,296	-		MIT1002_02575	0.10	-1.1
2,875,296	-		MIT1002_02575	0.10	-1.9
2,875,296	-		MIT1002_02575	0.10	-0.1
2,875,296	-		MIT1002_02575	0.10	+0.1
2,875,296	-		MIT1002_02575	0.10	+0.9
2,875,393	+		MIT1002_02575	0.17	-0.9
2,875,426	+		MIT1002_02575	0.19	-0.3
2,875,429	-		MIT1002_02575	0.19	+0.5
2,875,429	-		MIT1002_02575	0.19	+0.3
2,875,429	-		MIT1002_02575	0.19	-1.4
2,875,505	-		MIT1002_02575	0.25	-2.1
2,875,522	+		MIT1002_02575	0.26	-0.2
2,875,525	+		MIT1002_02575	0.26	+0.8
2,875,533	-		MIT1002_02575	0.27	-1.3
2,875,533	-		MIT1002_02575	0.27	+0.5
2,875,535	+		MIT1002_02575	0.27	+0.3
2,875,535	+		MIT1002_02575	0.27	-0.7
2,875,559	+		MIT1002_02575	0.28	-2.9
2,875,566	+		MIT1002_02575	0.29	+0.5
2,875,588	-		MIT1002_02575	0.30	-0.2
2,875,611	-		MIT1002_02575	0.32	-0.4
2,875,613	+		MIT1002_02575	0.32	+0.7
2,875,758	+		MIT1002_02575	0.42	-0.3
2,875,794	-		MIT1002_02575	0.45	-0.9
2,875,914	+		MIT1002_02575	0.53	+2.1
2,875,915	+		MIT1002_02575	0.53	-0.5
2,875,923	-		MIT1002_02575	0.54	-0.3
2,876,057	-		MIT1002_02575	0.63	-0.5
2,876,103	-		MIT1002_02575	0.66	+0.0
2,876,109	+		MIT1002_02575	0.67	+0.7
2,876,117	-		MIT1002_02575	0.67	+1.2
2,876,117	-		MIT1002_02575	0.67	-1.9
2,876,121	+		MIT1002_02575	0.68	-0.9
2,876,199	-		MIT1002_02575	0.73	-0.2
2,876,228	-		MIT1002_02575	0.75	+0.7
2,876,289	-		MIT1002_02575	0.79	+0.8
2,876,321	+		MIT1002_02575	0.82	+0.3
2,876,363	-		MIT1002_02575	0.84	+0.8
2,876,537	+				+0.3
2,876,693	-				-0.3
2,876,765	-				-0.9
2,876,776	-				+0.5
2,876,893	+		MIT1002_02576	0.11	+0.0
2,876,895	-		MIT1002_02576	0.11	-0.5
2,876,922	+		MIT1002_02576	0.14	+0.3
2,877,046	+		MIT1002_02576	0.31	+0.4
2,877,089	+		MIT1002_02576	0.37	+0.5
2,877,099	+		MIT1002_02576	0.38	-2.5
2,877,112	+		MIT1002_02576	0.40	-0.3
2,877,112	+		MIT1002_02576	0.40	-1.3
2,877,148	+		MIT1002_02576	0.45	+0.2
2,877,167	-		MIT1002_02576	0.47	-0.6
2,877,348	-		MIT1002_02576	0.71	-0.1
2,877,401	-		MIT1002_02576	0.78	-1.4
2,877,406	-		MIT1002_02576	0.79	-0.3
2,877,442	+		MIT1002_02576	0.84	-1.9
2,877,500	+				-1.3