Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02326

Experiment: monoculture; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 4
2,594,149	-		MIT1002_02324	0.81	-0.8
2,594,156	-		MIT1002_02324	0.82	+0.8
2,594,156	-		MIT1002_02324	0.82	-1.1
2,594,165	+		MIT1002_02324	0.82	-0.5
2,594,189	-		MIT1002_02324	0.84	-1.8
2,594,280	+				-1.0
2,594,394	+				-0.4
2,594,394	+				+0.5
2,594,476	+		MIT1002_02325	0.13	-1.0
2,594,478	-		MIT1002_02325	0.13	-1.5
2,594,484	-		MIT1002_02325	0.14	-0.4
2,594,484	-		MIT1002_02325	0.14	-1.2
2,594,488	+		MIT1002_02325	0.15	-0.5
2,594,488	+		MIT1002_02325	0.15	+2.0
2,594,496	-		MIT1002_02325	0.16	+0.3
2,594,496	-		MIT1002_02325	0.16	+0.6
2,594,533	-		MIT1002_02325	0.21	+0.2
2,594,561	+		MIT1002_02325	0.25	-1.1
2,594,574	-		MIT1002_02325	0.27	+0.9
2,594,606	-		MIT1002_02325	0.32	+0.4
2,594,745	-		MIT1002_02325	0.52	-1.4
2,594,828	-		MIT1002_02325	0.64	-1.9
2,594,845	-		MIT1002_02325	0.66	-0.8
2,594,877	+		MIT1002_02325	0.71	-0.1
2,594,884	+		MIT1002_02325	0.72	-1.1
2,594,894	+		MIT1002_02325	0.73	-0.6
2,594,906	+		MIT1002_02325	0.75	-1.9
2,595,032	-				-1.9
2,595,090	+				-0.2
2,595,128	+				-0.5
2,595,189	+				-0.2
2,595,382	-		MIT1002_02326	0.24	+0.4
2,595,389	+		MIT1002_02326	0.25	-0.7
2,595,389	-		MIT1002_02326	0.25	+0.3
2,595,416	+		MIT1002_02326	0.27	-0.4
2,595,422	-		MIT1002_02326	0.27	-0.4
2,595,426	+		MIT1002_02326	0.28	+0.6
2,595,450	+		MIT1002_02326	0.30	+1.0
2,595,450	+		MIT1002_02326	0.30	-0.7
2,595,531	+		MIT1002_02326	0.36	+0.3
2,595,532	+		MIT1002_02326	0.36	+0.1
2,595,539	-		MIT1002_02326	0.37	+0.4
2,595,715	+		MIT1002_02326	0.51	-1.1
2,595,738	-		MIT1002_02326	0.53	-0.4
2,595,738	-		MIT1002_02326	0.53	-0.3
2,595,864	+		MIT1002_02326	0.63	-0.7
2,595,992	+		MIT1002_02326	0.74	-0.0
2,596,032	-		MIT1002_02326	0.77	-2.0
2,596,144	+		MIT1002_02326	0.86	-0.4
2,596,183	-		MIT1002_02326	0.89	-2.0
2,596,203	+				-0.5
2,596,216	-				+0.3
2,596,216	-				-1.7
2,596,222	-				+0.6
2,596,228	-				-0.8
2,596,242	+				-0.0
2,596,246	+				+0.1
2,596,405	+		MIT1002_02327	0.23	-0.2
2,596,451	+		MIT1002_02327	0.32	+0.4
2,596,451	+		MIT1002_02327	0.32	+1.0
2,596,475	-		MIT1002_02327	0.37	-0.1
2,596,504	+		MIT1002_02327	0.43	-0.7
2,596,504	+		MIT1002_02327	0.43	-0.0
2,596,504	+		MIT1002_02327	0.43	-1.1
2,596,504	+		MIT1002_02327	0.43	-0.7
2,596,509	+		MIT1002_02327	0.45	-0.5
2,596,509	+		MIT1002_02327	0.45	-1.7
2,596,509	+		MIT1002_02327	0.45	-1.9
2,596,509	+		MIT1002_02327	0.45	-0.7
2,596,509	+		MIT1002_02327	0.45	-0.2
2,596,509	+		MIT1002_02327	0.45	-0.3
2,596,509	+		MIT1002_02327	0.45	-0.6
2,596,509	+		MIT1002_02327	0.45	-0.9
2,596,512	-		MIT1002_02327	0.45	+2.4
2,596,512	-		MIT1002_02327	0.45	+0.1
2,596,517	-		MIT1002_02327	0.46	-0.2
2,596,517	-		MIT1002_02327	0.46	-0.2
2,596,517	-		MIT1002_02327	0.46	-0.0
2,596,552	-		MIT1002_02327	0.54	+1.0
2,596,694	+		MIT1002_02327	0.84	-2.1
2,596,694	-		MIT1002_02327	0.84	-0.2
2,596,711	+		MIT1002_02327	0.87	+0.1
2,596,719	-		MIT1002_02327	0.89	-0.0
2,596,737	-				-3.1
2,596,752	+				-0.4
2,596,772	+				-1.0
2,596,775	-				-0.7
2,596,790	+				+0.4
2,596,798	-				-1.3
2,596,827	-		MIT1002_02328	0.21	-0.6
2,596,873	+		MIT1002_02328	0.40	-1.0
2,596,907	+		MIT1002_02328	0.53	+1.1
2,596,937	+		MIT1002_02328	0.65	-2.5
2,596,945	-		MIT1002_02328	0.69	-0.8
2,596,972	-		MIT1002_02328	0.80	-0.2
2,596,972	-		MIT1002_02328	0.80	-0.9
2,597,023	+				+0.4
2,597,040	-				+1.4
2,597,076	+				-0.1
2,597,126	+				-2.0
2,597,134	-				+1.0
2,597,157	+				-0.5
2,597,180	+				-0.4
2,597,191	+				+0.8
2,597,226	+		MIT1002_02329	0.10	+0.6
2,597,261	+		MIT1002_02329	0.18	-0.3
2,597,303	-		MIT1002_02329	0.26	+0.6