Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02229

Experiment: monoculture; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 4
2,489,283	+				-0.6
2,489,283	-				+0.9
2,489,291	-				+1.1
2,489,297	-				+0.4
2,489,463	-		MIT1002_02228	0.28	+1.2
2,489,463	-		MIT1002_02228	0.28	+0.1
2,489,490	+		MIT1002_02228	0.31	-1.4
2,489,630	+		MIT1002_02228	0.49	-0.6
2,489,630	+		MIT1002_02228	0.49	+0.6
2,489,635	+		MIT1002_02228	0.49	+0.6
2,489,638	-		MIT1002_02228	0.50	+1.0
2,489,638	-		MIT1002_02228	0.50	-0.2
2,489,697	+		MIT1002_02228	0.57	-1.5
2,489,705	-		MIT1002_02228	0.58	-0.1
2,489,758	-		MIT1002_02228	0.64	+0.4
2,489,814	-		MIT1002_02228	0.71	+0.3
2,489,867	+		MIT1002_02228	0.78	-0.1
2,489,875	-		MIT1002_02228	0.79	-0.0
2,489,875	-		MIT1002_02228	0.79	-0.1
2,489,912	-		MIT1002_02228	0.83	-0.2
2,489,977	+				+0.2
2,489,985	-				+0.5
2,489,989	+				-2.8
2,489,998	-				+1.1
2,489,999	+				-3.6
2,490,049	+				+0.7
2,490,271	+		MIT1002_02229	0.17	-0.7
2,490,297	+		MIT1002_02229	0.20	-0.4
2,490,305	-		MIT1002_02229	0.20	-0.4
2,490,346	+		MIT1002_02229	0.24	-0.2
2,490,354	-		MIT1002_02229	0.24	-0.1
2,490,362	+		MIT1002_02229	0.25	-0.9
2,490,377	-		MIT1002_02229	0.26	-0.0
2,490,405	-		MIT1002_02229	0.28	+0.0
2,490,439	+		MIT1002_02229	0.31	+0.2
2,490,447	-		MIT1002_02229	0.32	+0.8
2,490,503	-		MIT1002_02229	0.36	+1.2
2,490,551	-		MIT1002_02229	0.40	+1.1
2,490,551	-		MIT1002_02229	0.40	-1.2
2,490,588	+		MIT1002_02229	0.43	+0.4
2,490,596	-		MIT1002_02229	0.44	+0.4
2,490,652	+		MIT1002_02229	0.49	+1.5
2,490,725	-		MIT1002_02229	0.54	+1.9
2,490,774	+		MIT1002_02229	0.58	-0.7
2,490,818	-		MIT1002_02229	0.62	+0.5
2,490,822	-		MIT1002_02229	0.62	+0.6
2,490,891	-		MIT1002_02229	0.68	-0.2
2,490,975	+		MIT1002_02229	0.75	+0.7
2,490,984	-		MIT1002_02229	0.76	-1.5
2,491,033	+		MIT1002_02229	0.80	+1.9
2,491,033	+		MIT1002_02229	0.80	+0.2
2,491,041	-		MIT1002_02229	0.80	+1.2
2,491,088	-		MIT1002_02229	0.84	-0.6
2,491,122	-		MIT1002_02229	0.87	-0.3
2,491,262	+				-1.0
2,491,262	-				+0.2
2,491,313	+				+0.6
2,491,314	+				-1.2
2,491,368	-				-2.4
2,491,453	-				-0.8
2,491,577	+		MIT1002_02230	0.17	-0.4
2,491,600	+		MIT1002_02230	0.18	-1.0
2,491,600	+		MIT1002_02230	0.18	-1.6
2,491,600	+		MIT1002_02230	0.18	-2.1
2,491,608	-		MIT1002_02230	0.18	-1.2
2,491,613	-		MIT1002_02230	0.19	-1.0
2,491,630	+		MIT1002_02230	0.20	-2.4
2,491,630	+		MIT1002_02230	0.20	-1.6
2,491,638	-		MIT1002_02230	0.20	-1.2
2,491,638	-		MIT1002_02230	0.20	-1.4
2,491,638	-		MIT1002_02230	0.20	-1.7
2,491,647	+		MIT1002_02230	0.21	-1.7
2,491,655	-		MIT1002_02230	0.21	-0.2
2,491,685	+		MIT1002_02230	0.23	-0.3
2,491,685	+		MIT1002_02230	0.23	-1.8
2,491,782	-		MIT1002_02230	0.28	-1.1
2,491,881	-		MIT1002_02230	0.34	-1.0
2,491,930	+		MIT1002_02230	0.37	-1.4
2,491,975	-		MIT1002_02230	0.39	-1.4
2,492,070	+		MIT1002_02230	0.45	-1.5
2,492,101	-		MIT1002_02230	0.46	+9.5
2,492,139	+		MIT1002_02230	0.49	-0.4
2,492,192	-		MIT1002_02230	0.52	-2.1
2,492,193	+		MIT1002_02230	0.52	+0.4