Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02084

Experiment: monoculture; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 4
2,344,080	-		MIT1002_02083	0.53	-0.2
2,344,082	+		MIT1002_02083	0.53	+1.0
2,344,085	-		MIT1002_02083	0.53	-0.3
2,344,099	-		MIT1002_02083	0.54	+1.9
2,344,100	-		MIT1002_02083	0.54	+1.4
2,344,273	+		MIT1002_02083	0.63	+0.0
2,344,281	-		MIT1002_02083	0.64	-1.4
2,344,288	+		MIT1002_02083	0.64	-0.2
2,344,288	+		MIT1002_02083	0.64	-0.3
2,344,291	-		MIT1002_02083	0.64	+1.0
2,344,499	-		MIT1002_02083	0.75	+0.5
2,344,543	-		MIT1002_02083	0.78	-1.2
2,344,596	-		MIT1002_02083	0.81	-0.3
2,344,618	-		MIT1002_02083	0.82	+0.4
2,344,654	+		MIT1002_02083	0.84	+0.9
2,344,702	+		MIT1002_02083	0.86	+0.4
2,344,809	+				-2.5
2,344,916	-				+1.1
2,344,916	-				-1.0
2,344,918	+				-0.5
2,344,936	+				-0.2
2,344,962	+				+1.4
2,344,962	+				-1.4
2,344,962	+				+1.3
2,344,970	-				+1.5
2,344,974	+				+0.6
2,344,982	-				-0.1
2,345,041	-				-0.8
2,345,079	+				-0.2
2,345,114	+				-1.1
2,345,122	-				+2.4
2,345,210	+				-0.5
2,345,210	+				-0.4
2,345,210	+				+1.2
2,345,210	+				+0.2
2,345,218	-				+0.2
2,345,231	-				+1.3
2,345,450	-		MIT1002_02084	0.18	-1.1
2,345,450	-		MIT1002_02084	0.18	+1.3
2,345,450	-		MIT1002_02084	0.18	+1.2
2,345,522	+		MIT1002_02084	0.21	-0.2
2,345,703	+		MIT1002_02084	0.28	-1.3
2,345,706	-		MIT1002_02084	0.28	-0.6
2,345,857	-		MIT1002_02084	0.35	-0.8
2,345,884	+		MIT1002_02084	0.36	+0.7
2,345,940	-		MIT1002_02084	0.38	+1.1
2,345,942	+		MIT1002_02084	0.38	-0.0
2,345,949	+		MIT1002_02084	0.38	-1.0
2,346,026	+		MIT1002_02084	0.41	+1.1
2,346,136	+		MIT1002_02084	0.46	+0.8
2,346,144	-		MIT1002_02084	0.46	-0.5
2,346,237	+		MIT1002_02084	0.50	-1.0
2,346,237	+		MIT1002_02084	0.50	-0.8
2,346,237	+		MIT1002_02084	0.50	-0.7
2,346,245	-		MIT1002_02084	0.50	-0.4
2,346,274	-		MIT1002_02084	0.52	+1.4
2,346,320	+		MIT1002_02084	0.53	+0.2
2,346,334	+		MIT1002_02084	0.54	-1.1
2,346,418	+		MIT1002_02084	0.57	+0.3
2,346,426	-		MIT1002_02084	0.58	+1.8
2,346,480	+		MIT1002_02084	0.60	+0.3
2,346,480	+		MIT1002_02084	0.60	-0.2
2,346,488	-		MIT1002_02084	0.60	-1.5
2,346,488	-		MIT1002_02084	0.60	-0.4
2,346,516	+		MIT1002_02084	0.61	-1.0
2,346,516	+		MIT1002_02084	0.61	+0.7
2,346,524	-		MIT1002_02084	0.62	-0.1
2,346,524	-		MIT1002_02084	0.62	-0.8
2,346,531	-		MIT1002_02084	0.62	-0.2
2,346,640	+		MIT1002_02084	0.66	-0.4
2,346,672	+		MIT1002_02084	0.68	+0.0
2,346,677	+		MIT1002_02084	0.68	+0.0
2,346,677	+		MIT1002_02084	0.68	+0.4
2,346,680	-		MIT1002_02084	0.68	-1.4
2,346,685	-		MIT1002_02084	0.68	-0.4
2,346,685	-		MIT1002_02084	0.68	-1.7
2,346,707	+		MIT1002_02084	0.69	-2.1
2,346,708	+		MIT1002_02084	0.69	+0.4
2,346,708	+		MIT1002_02084	0.69	+0.7
2,346,708	+		MIT1002_02084	0.69	+0.6
2,346,716	-		MIT1002_02084	0.70	-0.3
2,346,716	-		MIT1002_02084	0.70	+0.3
2,346,787	-		MIT1002_02084	0.72	+0.4
2,346,795	+		MIT1002_02084	0.73	+0.5
2,346,795	+		MIT1002_02084	0.73	+1.2
2,346,803	-		MIT1002_02084	0.73	-0.2
2,346,803	-		MIT1002_02084	0.73	-0.5
2,346,803	-		MIT1002_02084	0.73	-0.8
2,346,803	-		MIT1002_02084	0.73	+0.1
2,346,803	-		MIT1002_02084	0.73	+0.3
2,346,833	+		MIT1002_02084	0.74	+0.6
2,346,877	+		MIT1002_02084	0.76	+1.1
2,346,935	-		MIT1002_02084	0.78	+2.6
2,346,968	+		MIT1002_02084	0.80	-0.1
2,346,969	+		MIT1002_02084	0.80	-0.4
2,346,983	-		MIT1002_02084	0.80	+0.9
2,347,036	-		MIT1002_02084	0.83	+0.2
2,347,081	-		MIT1002_02084	0.84	+2.0
2,347,112	+		MIT1002_02084	0.86	-1.2
2,347,143	-		MIT1002_02084	0.87	+0.9
2,347,154	-		MIT1002_02084	0.87	+1.2
2,347,173	-		MIT1002_02084	0.88	+0.8
2,347,183	-		MIT1002_02084	0.88	-0.1
2,347,234	+				-0.9
2,347,251	-				-0.5
2,347,274	+				-0.7
2,347,280	-				-0.9
2,347,294	-				-2.7
2,347,306	-				+0.2
2,347,584	+		MIT1002_02085	0.11	-0.6
2,347,592	-		MIT1002_02085	0.12	-0.3
2,347,597	-		MIT1002_02085	0.12	-0.2
2,347,779	+		MIT1002_02085	0.30	-1.4
2,348,110	+		MIT1002_02085	0.63	+0.0
2,348,220	+		MIT1002_02085	0.74	+0.3
2,348,244	+		MIT1002_02085	0.76	+1.1
2,348,249	+		MIT1002_02085	0.76	+0.3
2,348,252	-		MIT1002_02085	0.77	+0.0
2,348,252	-		MIT1002_02085	0.77	+0.0
2,348,252	-		MIT1002_02085	0.77	-0.6
2,348,252	-		MIT1002_02085	0.77	-0.7
2,348,252	-		MIT1002_02085	0.77	+0.1
2,348,252	-		MIT1002_02085	0.77	-0.5
2,348,268	+		MIT1002_02085	0.78	+0.6
2,348,312	+		MIT1002_02085	0.83	-0.9
2,348,391	-				-1.0
2,348,429	-				-1.0
2,348,449	-				-0.9