Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01372

Experiment: monoculture; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 4
1,522,667	-				+0.3
1,522,738	-				+1.3
1,522,756	-		MIT1002_01372	0.10	+0.3
1,522,768	-		MIT1002_01372	0.13	-0.8
1,522,783	-		MIT1002_01372	0.16	+2.0
1,522,784	+		MIT1002_01372	0.16	+0.6
1,522,820	+		MIT1002_01372	0.24	+1.1
1,522,886	-		MIT1002_01372	0.37	+0.8
1,522,888	+		MIT1002_01372	0.37	+0.5
1,522,950	+		MIT1002_01372	0.50	+2.5
1,522,980	-		MIT1002_01372	0.56	-0.2
1,522,980	-		MIT1002_01372	0.56	-0.5
1,522,985	-		MIT1002_01372	0.57	+0.7
1,522,985	-		MIT1002_01372	0.57	+1.8
1,523,119	+		MIT1002_01372	0.85	+1.1
1,523,128	-		MIT1002_01372	0.87	+0.2
1,523,166	-				+1.2
1,523,174	+				+0.4
1,523,316	-				-0.6
1,523,344	-				-0.5
1,523,369	+				+0.3
1,523,380	+				-0.7
1,523,407	-				+2.7
1,523,415	-				-0.8
1,523,415	-				+0.1
1,523,452	+				-1.8
1,523,563	-		MIT1002_01373	0.19	-2.2
1,523,615	-		MIT1002_01373	0.25	-1.4
1,523,736	+		MIT1002_01373	0.37	-0.0
1,523,765	+		MIT1002_01373	0.40	+0.3
1,524,133	+		MIT1002_01373	0.78	+0.9
1,524,162	-		MIT1002_01373	0.81	+0.5