Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01321

Experiment: monoculture; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 4
1,466,325	+		MIT1002_01320	0.58	+0.7
1,466,360	+		MIT1002_01320	0.60	+0.2
1,466,445	+		MIT1002_01320	0.65	+1.8
1,466,485	+		MIT1002_01320	0.68	+0.3
1,466,485	+		MIT1002_01320	0.68	+2.1
1,466,485	+		MIT1002_01320	0.68	+0.3
1,466,493	-		MIT1002_01320	0.68	+0.3
1,466,493	-		MIT1002_01320	0.68	+1.8
1,466,577	-		MIT1002_01320	0.73	+0.8
1,466,587	-		MIT1002_01320	0.74	+0.6
1,466,613	+		MIT1002_01320	0.75	+0.3
1,466,656	-		MIT1002_01320	0.78	-0.3
1,466,731	+		MIT1002_01320	0.83	+0.8
1,466,732	-		MIT1002_01320	0.83	+1.5
1,466,737	-		MIT1002_01320	0.83	+1.0
1,466,821	-		MIT1002_01320	0.88	+1.1
1,466,822	+		MIT1002_01320	0.88	+0.3
1,466,822	-		MIT1002_01320	0.88	+1.3
1,466,822	-		MIT1002_01320	0.88	+0.1
1,466,847	+		MIT1002_01320	0.89	-0.6
1,466,857	+				+1.0
1,466,857	+				+1.9
1,466,908	-				+1.5
1,466,957	+				+2.1
1,466,957	+				+1.1
1,466,965	-				-2.5
1,466,965	-				-0.3
1,466,965	-				+0.0
1,467,102	+				-3.6
1,467,124	-				+0.5
1,467,151	+				-0.4
1,467,159	-				+1.1
1,467,253	-				+1.2
1,467,273	-				+1.1
1,467,273	-				+0.4
1,467,317	-				-0.5
1,467,336	-		MIT1002_01321	0.14	+1.7
1,467,356	+		MIT1002_01321	0.18	-0.5
1,467,472	+		MIT1002_01321	0.45	+1.1
1,467,490	-		MIT1002_01321	0.49	+0.2
1,467,490	-		MIT1002_01321	0.49	+1.8
1,467,509	-		MIT1002_01321	0.53	+2.1
1,467,544	+		MIT1002_01321	0.61	+0.1
1,467,544	+		MIT1002_01321	0.61	-0.0
1,467,557	-		MIT1002_01321	0.64	+0.4
1,467,580	+		MIT1002_01321	0.69	-1.4
1,467,580	+		MIT1002_01321	0.69	+2.1
1,467,585	+		MIT1002_01321	0.70	-1.1
1,467,782	+				+0.6
1,467,787	+				-0.3
1,467,793	-				-0.0
1,467,834	+				+0.5
1,467,842	-				+0.5
1,467,842	-				+0.6
1,467,866	-				-0.9
1,467,875	+				-2.4
1,467,883	-				+3.3
1,467,883	-				-0.5
1,467,887	+				-1.2
1,467,887	+				-0.3
1,467,919	+				+0.4
1,467,944	-				+1.5
1,468,000	-				-0.3
1,468,021	-				-0.9
1,468,032	+				+0.3
1,468,032	+				+2.3
1,468,155	+		MIT1002_01322	0.12	-2.0
1,468,163	-		MIT1002_01322	0.13	+0.2
1,468,209	-		MIT1002_01322	0.15	-0.1
1,468,274	-		MIT1002_01322	0.18	-0.3
1,468,318	-		MIT1002_01322	0.20	+0.6
1,468,365	-		MIT1002_01322	0.23	-1.4
1,468,421	+		MIT1002_01322	0.25	+0.0
1,468,429	-		MIT1002_01322	0.26	+0.7
1,468,454	-		MIT1002_01322	0.27	-0.0