Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01061

Experiment: monoculture; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 4
1,171,365	-		MIT1002_01060	0.14	-1.6
1,171,365	-		MIT1002_01060	0.14	-0.2
1,171,365	-		MIT1002_01060	0.14	-0.3
1,171,439	+		MIT1002_01060	0.20	+1.1
1,171,467	+		MIT1002_01060	0.23	-0.7
1,171,480	+		MIT1002_01060	0.24	+0.8
1,171,485	+		MIT1002_01060	0.24	-1.9
1,171,485	+		MIT1002_01060	0.24	-0.3
1,171,494	+		MIT1002_01060	0.25	-0.3
1,171,521	+		MIT1002_01060	0.28	+1.0
1,171,572	-		MIT1002_01060	0.32	-0.6
1,171,583	-		MIT1002_01060	0.33	-0.5
1,171,641	-		MIT1002_01060	0.38	+2.2
1,171,641	-		MIT1002_01060	0.38	+1.6
1,171,652	+		MIT1002_01060	0.39	+0.5
1,171,657	+		MIT1002_01060	0.40	-1.8
1,171,657	+		MIT1002_01060	0.40	+0.2
1,171,660	-		MIT1002_01060	0.40	-0.5
1,171,660	-		MIT1002_01060	0.40	-0.2
1,171,660	-		MIT1002_01060	0.40	-1.4
1,171,665	-		MIT1002_01060	0.40	-1.1
1,171,665	-		MIT1002_01060	0.40	+0.5
1,171,763	-		MIT1002_01060	0.49	-1.4
1,171,765	-		MIT1002_01060	0.49	+1.7
1,171,803	+		MIT1002_01060	0.52	+0.4
1,171,811	-		MIT1002_01060	0.53	+0.6
1,171,977	+		MIT1002_01060	0.68	-1.0
1,171,977	+		MIT1002_01060	0.68	+0.7
1,171,977	+		MIT1002_01060	0.68	+0.7
1,171,977	+		MIT1002_01060	0.68	+1.1
1,171,977	+		MIT1002_01060	0.68	+1.3
1,171,978	-		MIT1002_01060	0.68	+0.0
1,171,978	-		MIT1002_01060	0.68	-1.7
1,171,985	-		MIT1002_01060	0.68	+1.4
1,171,985	-		MIT1002_01060	0.68	+1.3
1,171,985	-		MIT1002_01060	0.68	+0.6
1,172,173	+		MIT1002_01060	0.85	+0.5
1,172,181	-		MIT1002_01060	0.85	-2.2
1,172,308	-				-1.7
1,172,342	-				+0.9
1,172,414	-		MIT1002_01061	0.12	+1.0
1,172,493	-		MIT1002_01061	0.25	+0.7
1,172,579	-		MIT1002_01061	0.39	-0.4
1,172,592	+		MIT1002_01061	0.41	-2.2
1,172,651	-		MIT1002_01061	0.51	-2.3
1,172,651	-		MIT1002_01061	0.51	+0.9
1,172,651	-		MIT1002_01061	0.51	+0.6
1,172,665	+		MIT1002_01061	0.53	+0.4
1,172,692	+		MIT1002_01061	0.57	-0.3
1,172,785	-		MIT1002_01061	0.72	+0.5
1,172,845	+		MIT1002_01061	0.82	+1.2
1,172,855	+		MIT1002_01061	0.83	-0.8
1,172,879	+		MIT1002_01061	0.87	-0.7
1,172,892	+		MIT1002_01061	0.89	+1.0
1,172,937	-				-0.2
1,172,965	+				-1.0
1,172,965	+				+1.7
1,173,062	+		MIT1002_01062	0.13	-0.1
1,173,070	-		MIT1002_01062	0.14	-0.3
1,173,072	+		MIT1002_01062	0.15	+0.3
1,173,081	+		MIT1002_01062	0.16	-0.2
1,173,123	-		MIT1002_01062	0.22	-2.1
1,173,133	+		MIT1002_01062	0.23	-0.1
1,173,144	+		MIT1002_01062	0.25	+1.9
1,173,170	-		MIT1002_01062	0.28	-0.5
1,173,170	-		MIT1002_01062	0.28	-0.1
1,173,228	+		MIT1002_01062	0.37	-0.5
1,173,236	-		MIT1002_01062	0.38	-1.0
1,173,249	-		MIT1002_01062	0.40	-0.5
1,173,299	+		MIT1002_01062	0.47	+0.6
1,173,301	+		MIT1002_01062	0.47	+0.3
1,173,515	-		MIT1002_01062	0.77	+0.9
1,173,570	+		MIT1002_01062	0.85	-0.4
1,173,570	+		MIT1002_01062	0.85	-0.4
1,173,578	-		MIT1002_01062	0.86	-1.1
1,173,670	+				-0.5
1,173,672	+				+0.1
1,173,672	+				-1.1
1,173,672	+				-0.3
1,173,680	-				+1.1
1,173,680	-				+0.4
1,173,703	+				+0.0
1,173,875	-		MIT1002_01063	0.18	+0.0