Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00998

Experiment: monoculture; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 4
1,104,022	+		MIT1002_00996	0.60	+0.3
1,104,022	+		MIT1002_00996	0.60	+0.3
1,104,030	-		MIT1002_00996	0.60	-0.0
1,104,045	+		MIT1002_00996	0.62	-0.2
1,104,059	-		MIT1002_00996	0.63	-0.2
1,104,191	+		MIT1002_00996	0.76	-0.1
1,104,198	-		MIT1002_00996	0.76	-0.0
1,104,198	-		MIT1002_00996	0.76	+1.5
1,104,198	-		MIT1002_00996	0.76	+0.0
1,104,295	-		MIT1002_00996	0.86	+0.2
1,104,304	-		MIT1002_00996	0.86	+0.3
1,104,305	-		MIT1002_00996	0.87	-0.2
1,104,307	+		MIT1002_00996	0.87	-1.8
1,104,355	+				-1.1
1,104,363	-				+0.4
1,104,424	+				+0.8
1,104,582	+				+0.6
1,104,590	-				+0.7
1,104,604	+				+0.3
1,104,612	-				-0.7
1,104,612	-				+0.7
1,104,893	+		MIT1002_00997	0.69	+0.3
1,105,012	+				+1.1
1,105,017	+				+0.7
1,105,017	+				+0.4
1,105,025	-				+0.9
1,105,108	-		MIT1002_00998	0.11	+0.5
1,105,122	+		MIT1002_00998	0.13	+0.1
1,105,134	+		MIT1002_00998	0.14	-0.0
1,105,135	-		MIT1002_00998	0.14	+0.1
1,105,168	+		MIT1002_00998	0.19	-0.1
1,105,176	+		MIT1002_00998	0.19	+0.7
1,105,181	-		MIT1002_00998	0.20	-0.5
1,105,218	+		MIT1002_00998	0.25	-0.1
1,105,218	+		MIT1002_00998	0.25	-1.8
1,105,225	+		MIT1002_00998	0.25	-0.5
1,105,226	-		MIT1002_00998	0.26	-0.3
1,105,250	+		MIT1002_00998	0.29	-0.1
1,105,250	+		MIT1002_00998	0.29	-0.2
1,105,250	+		MIT1002_00998	0.29	+1.0
1,105,250	+		MIT1002_00998	0.29	+2.3
1,105,250	-		MIT1002_00998	0.29	-0.1
1,105,282	+		MIT1002_00998	0.32	+2.5
1,105,395	-		MIT1002_00998	0.46	+1.5
1,105,404	+		MIT1002_00998	0.47	+0.7
1,105,404	+		MIT1002_00998	0.47	+0.5
1,105,404	+		MIT1002_00998	0.47	+1.6
1,105,407	-		MIT1002_00998	0.48	-0.5
1,105,428	-		MIT1002_00998	0.50	-1.5
1,105,531	-		MIT1002_00998	0.63	-0.0
1,105,531	-		MIT1002_00998	0.63	-1.5
1,105,556	+		MIT1002_00998	0.66	+0.5
1,105,556	+		MIT1002_00998	0.66	+0.2
1,105,590	-		MIT1002_00998	0.70	+0.7
1,105,710	+		MIT1002_00998	0.85	+0.2
1,105,929	+				+0.5
1,105,929	+				-1.3
1,105,954	-		MIT1002_00999	0.12	-1.0
1,105,959	-		MIT1002_00999	0.13	-1.0
1,105,975	+		MIT1002_00999	0.17	+0.2
1,105,985	-		MIT1002_00999	0.19	-0.5
1,106,009	-		MIT1002_00999	0.24	-0.6
1,106,046	+		MIT1002_00999	0.33	-1.0
1,106,068	-		MIT1002_00999	0.38	+0.3
1,106,070	+		MIT1002_00999	0.38	-0.6
1,106,070	+		MIT1002_00999	0.38	+2.1
1,106,133	+		MIT1002_00999	0.52	-2.0
1,106,163	+		MIT1002_00999	0.59	-0.7
1,106,163	+		MIT1002_00999	0.59	-1.3
1,106,183	+		MIT1002_00999	0.63	-0.7
1,106,242	+		MIT1002_00999	0.76	-0.1
1,106,267	-		MIT1002_00999	0.82	-0.1
1,106,284	+		MIT1002_00999	0.86	-0.2
1,106,315	+				-0.3
1,106,391	-				-0.4
1,106,489	-				+0.0
1,106,512	-				-0.0